EY753451

Overview
NameEY753451
Unique NameEY753451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753451_ssr202 microsatellite EY753451_ssr202:202..225. BLAST: Citrus ESTs to Prunus persica proteins V1
EY753451_ssr104 microsatellite EY753451_ssr104:104..127. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: TM1L2_XENLA (TOM1-like protein 2 OS=Xenopus laevis GN=tom1l2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.158e-24
Identity = 68/162 (41.98%), Postives = 98/162 (60.49%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQ-HKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVL-GEMVKIV--KKKPDMQLRDKILVLLDSWQEAFGG----PGGKHPQYYWAYEDLRRYGVQFPKRSPDA-APIFTPXVSHPLXD 702
            ++KAT   L S DWT+N++ICD IN  +   KD ++A+KKRL  ++N +  +LALT+LET VKNCG   H Q+  R+ + G +VKI+  K  P   ++DK+L L+ +W +AF       G  H      YE+L+R G++FP    DA +PI TP  S P  D
Sbjct:   17 IEKATDGSLQSEDWTLNMEICDIINETEEGPKDAMRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHVQVTHRDFIDGILVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVH-----IYEELKRKGIEFPMADLDALSPIHTPQRSVPEVD 173          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: TM1L2_HUMAN (TOM1-like protein 2 OS=Homo sapiens GN=TOM1L2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.580e-23
Identity = 68/162 (41.98%), Postives = 97/162 (59.88%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQ-HKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGE-MVKIV--KKKPDMQLRDKILVLLDSWQEAFGG----PGGKHPQYYWAYEDLRRYGVQFPKRSPDA-APIFTPXVSHPLXD 702
            ++KAT   L S DWT+N++ICD IN  +   KD ++A+KKRL  ++N +  +LALT+LET VKNCG   H  +A R+ +   +VKI+  K  P   ++DK+L L+ +W +AF       G  H      YE+L+R GV+FP    DA +PI TP  S P  D
Sbjct:   17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVH-----IYEELKRKGVEFPMADLDALSPIHTPQRSVPEVD 173          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: TM1L2_MOUSE (TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.064e-23
Identity = 67/162 (41.36%), Postives = 97/162 (59.88%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQ-HKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGE-MVKIV--KKKPDMQLRDKILVLLDSWQEAFGG----PGGKHPQYYWAYEDLRRYGVQFPKRSPDA-APIFTPXVSHPLXD 702
            ++KAT   L S DWT+N++ICD IN  +   KD ++A+KKRL  ++N +  +LALT+LET VKNCG   H  +A R+ +   +VKI+  K  P   ++DK+L L+ +W +AF       G  H      YE+L+R G++FP    DA +PI TP  S P  D
Sbjct:   17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLSGNRNYREVMLALTVLETCVKNCGHRFHLLVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVH-----IYEELKRRGIEFPMADLDALSPIHTPQRSVPEMD 173          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: TOM1_MOUSE (Target of Myb protein 1 OS=Mus musculus GN=Tom1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.643e-20
Identity = 63/151 (41.72%), Postives = 85/151 (56.29%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQ-HKNSKVQLLALTLLETMVKNCGDFVHFQIAER----NVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPKRSPD-AAPIFTP 678
            ++KAT   L S DW +N++ICD IN  +   KD  +AVKKR+  +KN    +LALT+LET VKNCG   H  +A +    NVL   + + K  P   + DK+L L+ SW +AF             YEDLRR G++FP    D  +PI TP
Sbjct:   17 IEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIMGNKNFHEVMLALTVLETCVKNCGHRFHVLVANQDFVENVLVRTI-LPKNNPPTIVHDKVLNLIQSWADAFRS-SPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTP 165          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: TOM1_HUMAN (Target of Myb protein 1 OS=Homo sapiens GN=TOM1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.758e-20
Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRL-QHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVK---IVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPKRSPD-AAPIFTP 678
            ++KAT   L S DW +N++ICD IN  +   KD ++AVKKR+  +KN    +LALT+LET VKNCG   H  +A ++ +  ++    + K  P   + DK+L L+ SW +AF             YEDLRR G++FP    D  +PI TP
Sbjct:   17 IEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRS-SPDLTGVVTIYEDLRRKGLEFPMTDLDMLSPIHTP 165          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: HGS_RAT (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus GN=Hgs PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.214e-20
Identity = 49/134 (36.57%), Postives = 82/134 (61.19%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPK 645
            +DKATS+LL+  DW   + ICD I     QAK  V ++KK++  KN  V L AL ++E++VKNCG  VH ++A +  + E+ +++K++ ++ +R+KIL L+ +W  AF     K+      Y+ ++  G  FP+
Sbjct:   12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAFRNE-PKYKVVQDTYQIMKVEGHVFPE 144          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: HGS_MOUSE (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus GN=Hgs PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.214e-20
Identity = 49/134 (36.57%), Postives = 82/134 (61.19%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPK 645
            +DKATS+LL+  DW   + ICD I     QAK  V ++KK++  KN  V L AL ++E++VKNCG  VH ++A +  + E+ +++K++ ++ +R+KIL L+ +W  AF     K+      Y+ ++  G  FP+
Sbjct:   12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAFRNE-PKYKVVQDTYQIMKVEGHVFPE 144          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: HGS_HUMAN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Homo sapiens GN=HGS PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.060e-19
Identity = 49/134 (36.57%), Postives = 81/134 (60.45%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPK 645
            +DKATS+LL+  DW   + ICD I     QAK  V ++KK++  KN  V L AL ++E++VKNCG  VH ++A +  + E+  ++K++ ++ +R+KIL L+ +W  AF     K+      Y+ ++  G  FP+
Sbjct:   12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFRNE-PKYKVVQDTYQIMKVEGHVFPE 144          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: HGS_BOVIN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Bos taurus GN=HGS PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.060e-19
Identity = 49/134 (36.57%), Postives = 81/134 (60.45%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPK 645
            +DKATS+LL+  DW   + ICD I     QAK  V ++KK++  KN  V L AL ++E++VKNCG  VH ++A +  + E+  ++K++ ++ +R+KIL L+ +W  AF     K+      Y+ ++  G  FP+
Sbjct:   12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVSSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFRNE-PKYKVVQDTYQIMKVEGHVFPE 144          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: TOM1_CHICK (Target of Myb protein 1 OS=Gallus gallus GN=TOM1 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.808e-19
Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRL-QHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVK---IVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPKRSPD-AAPIFTP 678
            +++AT   L   DW++N++ICD IN  +   KD  +A+KKR+  +KN    +LALT+LET VKNCG   H  +A ++ +  ++    + K  P   + DK+L L+ SW +AF             YEDLRR G++FP    D  +PI TP
Sbjct:   17 IERATDGSLRGEDWSLNMEICDIINETEEGPKDAFRAIKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHILVASQDFVESVLVRTILPKNNPPAIVHDKVLTLIQSWADAFRS-SPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTP 165          
The following BLAST results are available for this feature:
BLAST of EY753451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
TM1L2_XENLA4.158e-2441.98TOM1-like protein 2 OS=Xenopus laevis GN=tom1l2 PE... [more]
TM1L2_HUMAN1.580e-2341.98TOM1-like protein 2 OS=Homo sapiens GN=TOM1L2 PE=1... [more]
TM1L2_MOUSE2.064e-2341.36TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=1... [more]
TOM1_MOUSE3.643e-2041.72Target of Myb protein 1 OS=Mus musculus GN=Tom1 PE... [more]
TOM1_HUMAN4.758e-2040.00Target of Myb protein 1 OS=Homo sapiens GN=TOM1 PE... [more]
HGS_RAT6.214e-2036.57Hepatocyte growth factor-regulated tyrosine kinase... [more]
HGS_MOUSE6.214e-2036.57Hepatocyte growth factor-regulated tyrosine kinase... [more]
HGS_HUMAN1.060e-1936.57Hepatocyte growth factor-regulated tyrosine kinase... [more]
HGS_BOVIN1.060e-1936.57Hepatocyte growth factor-regulated tyrosine kinase... [more]
TOM1_CHICK1.808e-1938.00Target of Myb protein 1 OS=Gallus gallus GN=TOM1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-H09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753451 ID=EY753451; Name=EY753451; organism=Citrus sinensis; type=EST; length=857bp
CAACGATAACGTTGAAGGTAAAAAAAAAAAAAAGATATATAAATTCTTTG
AGCTTGAAAGCATTCATTGGCGGTGTATTTTTCTTGGACCGAATTTTCTC
GTTAAACAAACAAACAAACAAACAAACAGGAAAAAGTTTTCATTTTCTTT
TTCTGTTATCTAATTTGGAGGGAGAGATAGAGAGTAAAGATGATGTCGTC
ATCGTCGTCGTCGTCGTCGTCGTCGTCTTCGGCGACTGTGGCAGTTGACA
AGGCGACCAGCGAGCTTTTGATTAGTCCTGATTGGACTATGAACATCGAT
ATCTGTGATTCCATCAATTCTCATCAGTGGCAGGCGAAAGATGTTGTGAA
AGCAGTGAAGAAAAGGTTACAGCACAAGAACTCAAAAGTGCAACTTCTTG
CGTTGACGCTTTTAGAGACGATGGTGAAGAATTGTGGTGATTTTGTTCAT
TTTCAAATTGCTGAGAGGAATGTCTTGGGAGAGATGGTTAAAATTGTGAA
GAAGAAGCCAGATATGCAGCTGAGGGATAAAATCTTGGTTTTATTAGATT
CTTGGCAAGAGGCATTCGGTGGACCTGGGGGAAAACATCCTCAGTACTAC
TGGGCTTATGAGGATTTAAGGCGTTATGGAGTACAATTTCCCAAGCGTTC
ACCAGATGCTGCTCCTATATTTACACCTNCTGTTTCCCACCCACTCTANG
ACAAGCTCAAGCTAGTTATGGAATGCCTAGCATTTCCTCAAGAAAGCTTG
ACGAAACAATGGCGACAGAGGTTGAAACTTTAGATTTTCAAGCTTGGATC
TATGCGAGATGTTATGGAGCTGTTAAGTGACTGCTGCAAGCTGTAATCCT
AGCGACG
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