EY753439

Overview
NameEY753439
Unique NameEY753439
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4944 contig Csv1_Contig4944:511..1072. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY753439 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 2 
Query:    2 SVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 133
            SVFHPGSNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:   68 SVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of EY753439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN1.543e-1375.00Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-G07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753439 ID=EY753439; Name=EY753439; organism=Citrus sinensis; type=EST; length=563bp
GAGCGTGTTTCACCCCGGTAGCAACCTTGCTACTAGGGGTATCGGTGCAG
AGGTCTTTGACAAGCCCACACATCCTAACTCTCCCACTGTTTATGACTGG
CTTTACAGTGGGGAGACTAGGAGCAAGCATCATCACTGAGTGGATGATAC
GCTCCAGCGATGTAAATGAATGTGATGGGTCACCAACTCACCGGATGAGT
TGCCTGTAGTCTGTAGATAGTGTCGTTTCGTTTTGGATTTCGCAACGTGT
CCTTGTCGTTTTGTTAATGCTATTTGTATTACGTGTCCTTCCTATCTAAA
GTTTGGTTTTAAAATGCTGCTGACTAAAAGTAAACTAAAGACTGTGATGT
TTTTATATCATATAATTTAATAATTGTATGTGATGTGAGGATTGCTAAGC
TGTGGGCGGAGATGAAAGGTTGCTGGTTTTTGGGTTTAGGACATGTTTTT
GATTGTCATTTTGTAAGAGCCAAGATCATCCCTTCGTGGACGGTCGTGAT
GAGCATATATGTTTTATTATTAATAAATAAGTTGCTTCTCTGAAAAAAAA
AAAAAAAAAAAAA
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