EY753420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 3.833e-100 Identity = 182/239 (76.15%), Postives = 197/239 (82.43%), Query Frame = 2 Query: 137 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNLWVWGKMRSQGRISSSRK*RMEDXXXXQSWGTLFKVLLQGVGPYR 853 E ARQI+G+R +QS T RK SFVVRAASTPPVKQGA+R LWFASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEPKWLAYGEVINGR+AMLGA GAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMG+QYFLG EK LGGSGDPAYPGGPLFN +GK + ++ + G + L+ GVGPY+ Sbjct: 17 EAARQIIGSRISQSVT---RKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQ 252 HSP 2 Score: 73.559 bits (179), Expect = 1.765e-12 Identity = 35/50 (70.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 718 PLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 PLG GKDEKS K+ KLKE+KNGR M AILGYF+Q LVT G QNL DH Sbjct: 208 PLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDH 257
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 2.843e-95 Identity = 176/240 (73.33%), Postives = 190/240 (79.17%), Query Frame = 2 Query: 137 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGA-DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNLWVWGKMRSQGRISSSRK*RMEDXXXXQSWGTLFKVLLQGVGPYR 853 E RQ ARS S G SRKG +VRAA+TPPVKQG DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGEVINGR+AMLGAVGAIAPE LGK GLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMG+QYFLG EK GGSG+PAYPGGP FN +GK + ++ + G + L+ GVGPY+ Sbjct: 17 EAVRQSFRARSLPSSVGCSRKG--LVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQ 254 HSP 2 Score: 75.8702 bits (185), Expect = 3.557e-13 Identity = 37/50 (74.00%), Postives = 39/50 (78.00%), Query Frame = 1 Query: 718 PLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 PLG GKDEKS K+ KLKEVKNGR M AILGYF+QGLVT G QNL DH Sbjct: 210 PLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDH 259
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.587e-27 Identity = 68/168 (40.48%), Postives = 88/168 (52.38%), Query Frame = 2 Query: 218 AASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFN 718 +A T K A + W S YL GSL GD GFDPLGL+ DPE KW E++NGR+AMLG G + PE+ K G+I W+ AG Y+A TLFV+E L + E RR+QD NPGS+ + F++Y G+ YPGG +FN Sbjct: 42 SAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII---NVPEWYD------AGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI--FKQYSLPKGEVGYPGG-IFN 191 HSP 2 Score: 36.1946 bits (82), Expect = 1.587e-27 Identity = 18/39 (46.15%), Postives = 23/39 (58.97%), Query Frame = 1 Query: 751 KDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 ++ K KE+ NGR M A LG+ VQ VT G +NL H Sbjct: 199 QEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQH 237
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.066e-27 Identity = 72/181 (39.78%), Postives = 93/181 (51.38%), Query Frame = 2 Query: 179 PTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFN 718 P G S SF V A K+G W S YL GSLPGD GFDPLGL+ DPE +W E++NGR+AMLG G + PE+ G+I W+ AG Y+A TLFV+E L + E RR+QD NPGS+ + F++Y +G+ YPGG +FN Sbjct: 38 PVGCSPSASFKVEA------KKGE----WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENL------RWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII---NVPKWY------AAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPI--FKQYSLPAGEVGYPGG-IFN 190 HSP 2 Score: 35.8094 bits (81), Expect = 2.066e-27 Identity = 17/36 (47.22%), Postives = 20/36 (55.56%), Query Frame = 1 Query: 760 KLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 K KE+ NGR M A LG+ +Q VT G NL H Sbjct: 201 KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQH 236
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.327e-27 Identity = 87/240 (36.25%), Postives = 115/240 (47.92%), Query Frame = 2 Query: 152 ILGARSAQSPTGSS-RKGSFVV----RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNLWVWGKMRSQGRISSSRK*RMEDXXXXQ--SWGTLFKVLLQGVGP 847 I+GA A G R F+ R+ + V DRPLWF +LDGSLPGD+GFDPLGL SDPE KW A E+++ R+AMLGA G PE L K G++ +W+ AG Y+ D TLFV+E+ L+G+AE RR+ D PG + K G D YPGG F+ WG S +I R +++ G F+ + G GP Sbjct: 26 IVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVL---NTPSWY------TAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG--TDVGYPGGLWFDPLGWGS-GSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 247
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.148e-26 Identity = 79/214 (36.92%), Postives = 108/214 (50.47%), Query Frame = 2 Query: 215 RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNLWVWGKMRSQGRISSSRK*RMEDXXXXQ--SWGTLFKVLLQGVGP 847 R+A+T V DRPLWF +LDGSLPGD+GFDPLGL SDPE +W E+++ R+AMLGA G PE+L K G++ +W+ AG Y+ D TLF++E+ L+G+AE RR+ D PG + K G D YPGG F+ WG S +I R +++ G F+ + G GP Sbjct: 52 RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQAELVHCRWAMLGAAGIFIPELLTKIGIL---NTPSWY------TAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG--TDVGYPGGLWFDPLGWGS-GSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 247
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.609e-24 Identity = 63/162 (38.89%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDP 691 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ +++ LMGF E R G +G G +K Y GG+ DP Sbjct: 49 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR----VGGGPLGE----GLDKVYPGGAFDP 194 HSP 2 Score: 56.225 bits (134), Expect = 5.609e-24 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 + PLGL D + + K+KE+KNGR M ++ G+FVQ +VT G ++NL+DH Sbjct: 191 AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDH 243
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.609e-24 Identity = 63/162 (38.89%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDP 691 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ +++ LMGF E R G +G G +K Y GG+ DP Sbjct: 49 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR----VGGGPLGE----GLDKVYPGGAFDP 194 HSP 2 Score: 56.225 bits (134), Expect = 5.609e-24 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 + PLGL D + + K+KE+KNGR M ++ G+FVQ +VT G ++NL+DH Sbjct: 191 AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDH 243
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.609e-24 Identity = 63/162 (38.89%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDP 691 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF E R G +G G +K Y GG+ DP Sbjct: 51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGEA--VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYR----VGGGPLGE----GLDKIYPGGAFDP 196 HSP 2 Score: 58.151 bits (139), Expect = 5.609e-24 Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 + PLGL D ++ + K+KE+KNGR M ++ G+FVQ +VT G ++NL+DH Sbjct: 193 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDH 245
BLAST of EY753420 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.608e-23 Identity = 62/166 (37.35%), Postives = 80/166 (48.19%), Query Frame = 2 Query: 245 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 706 GADRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G I PE+L K G+ Q WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG Sbjct: 50 GADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCIFPELLSKNGV--QFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGP----------------LGEGLDPLYPGG 191 HSP 2 Score: 56.225 bits (134), Expect = 1.608e-23 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 709 SIQPLGLGKDEKSRKDFKLKEVKNGRXXMXAILGYFVQGLVTRSGALQNLWDH 867 + PLGL D ++ + K+KE+KNGR M ++ G+FVQ +VT G ++NL DH Sbjct: 192 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADH 244 The following BLAST results are available for this feature:
BLAST of EY753420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753420 ID=EY753420; Name=EY753420; organism=Citrus sinensis; type=EST; length=896bpback to top |