EY753413

Overview
NameEY753413
Unique NameEY753413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753413 vs. ExPASy Swiss-Prot
Match: UP12_ORYSJ (Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0242700 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 1.431e-40
Identity = 72/127 (56.69%), Postives = 98/127 (77.17%), Query Frame = 1 
Query:  256 SDQDADYIPMPHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPKKKLDVDIAT 636
            S  + D +P P V+IDQDS+ DATIV+++ GDRLG L+DTMNALK+LGL+V K +V  + + K  K  IT+L TGRK+ +P+LLE +RLTIINN+++YHPE+S QLA+G  FG + P + +DVDIAT
Sbjct:   67 SSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAITKLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIAT 193

HSP 2 Score: 37.3502 bits (85), Expect = 1.431e-40
Identity = 15/39 (38.46%), Postives = 27/39 (69.23%), Query Frame = 3 
Query:  639 IHVKEDGPKKNLAFIKTPDPPGILGKIMKNIADVNVDVK 755
            I + +DGP ++L  ++T D PG+L  ++K I D+N+ V+
Sbjct:  195 IDIYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQ 233
[Close]
BLAST of EY753413 vs. ExPASy Swiss-Prot
Match: UP12_ORYSI (Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_027381 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 1.431e-40
Identity = 72/127 (56.69%), Postives = 98/127 (77.17%), Query Frame = 1 
Query:  256 SDQDADYIPMPHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKVEDPDLLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPKKKLDVDIAT 636
            S  + D +P P V+IDQDS+ DATIV+++ GDRLG L+DTMNALK+LGL+V K +V  + + K  K  IT+L TGRK+ +P+LLE +RLTIINN+++YHPE+S QLA+G  FG + P + +DVDIAT
Sbjct:   67 SSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAITKLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIAT 193

HSP 2 Score: 37.3502 bits (85), Expect = 1.431e-40
Identity = 15/39 (38.46%), Postives = 27/39 (69.23%), Query Frame = 3 
Query:  639 IHVKEDGPKKNLAFIKTPDPPGILGKIMKNIADVNVDVK 755
            I + +DGP ++L  ++T D PG+L  ++K I D+N+ V+
Sbjct:  195 IDIYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQ 233
The following BLAST results are available for this feature:
BLAST of EY753413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UP12_ORYSJ1.431e-4056.69Unknown protein DS12 from 2D-PAGE of leaf, chlorop... [more]
UP12_ORYSI1.431e-4056.69Unknown protein DS12 from 2D-PAGE of leaf, chlorop... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-E03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753413 ID=EY753413; Name=EY753413; organism=Citrus sinensis; type=EST; length=869bp
CGAAAGCTCTTCTTCAATTCGATGGCTTTTACAGCTACTCATTTATTCTC
TTCTACGGCGTCGTCTTCTTCGACTGCTCTCCATCGATCTAAATTCCTTG
ATTCCGATTTTGCCGCTCCGTTTTCTCATGATTCATTTCATCTCATTAAC
TTCTCCCGCAGATTTTACGAACAAGGAATTTGTCTTTCGAGAAAAAAGAA
TATTTTGTTTGCCTCTGTCAACGGTACGAATGCTGTGAGTCCAACCCCCT
TGAAATCGGACCAAGATGCTGATTACATTCCGATGCCACATGTTCTGATA
GACCAGGATTCGAATTCTGATGCAACAATTGTGCAACTCAGTTTTGGAGA
TCGTCTTGGAGCTCTCATTGACACGATGAATGCCCTGAAAGACTTGGGAT
TGGACGTGGCTAAGGGAACTGTTAATACTGAAGGTTCAGTCAAACAGACA
AAATTTTTCATAACACGATTAGACACCGGGCGCAAAGTTGAAGATCCTGA
CTTGCTAGAGAGAATTCGACTTACCATCATTAACAATCTTTTGAAGTATC
ATCCAGAATCTAGCGAGCAACTTGCCATGGGCGAGGCTTTCGGGATAAAA
GCTCCAAAGAAAAAGCTTGATGTTGATATTGCCACCCAATACATGTCAAG
GAAGATGGGCCTAAAAAAAACCTTGCTTTTATTAAAACACCCGATCCCCC
CGGGATACTTGGAAAAATCATGAAAAACATTGCTGATGTAAATGTTGATG
TGAAACCCCAGAAATTGACCAGAAGGCCTTGGTGCCAAAAACAATTCAGT
GTCACTCGGAGGCCCCACATTAAACATTTTTTTGCTTAGGGGTGGGGACC
GTCTCGCAACCTCCTCCAA
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