EY753372

Overview
NameEY753372
Unique NameEY753372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2455 contig Csv1_Contig2455:64..924. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753372 vs. ExPASy Swiss-Prot
Match: PNO1_NEMVE (RNA-binding protein pno1 OS=Nematostella vectensis GN=pno1 PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.421e-64
Identity = 117/196 (59.69%), Postives = 156/196 (79.59%), Query Frame = 2
Query:  134 KPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILXSFANIKIARDSLCSLILGSPAGKVYSKLXAVTAXLAESF 721
            +P F P+KA +++GG+ + RK+ V  HRY+PLK+ WM+I+TP+ E +K+ IR NL +R VE++   +T DI  +QK ADFV AF+LGF+V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+A++KIHIL SF NIKIAR ++C+LILGSP  KVY  + AV +  AE F
Sbjct:   43 RPSFPPVKAQKLAGGKSETRKIPVPSHRYTPLKENWMKIFTPVVEHLKLQIRFNLGSRHVEIRASKETSDIGAVQKAADFVQAFILGFEVEDALALIRLDDLFLESFEIADVKPLKGDHLSRAIGRVAGKGGKTKFTIENVTKTRIVLAETKIHILGSFQNIKIARTAICNLILGSPPSKVYGNMRAVASRSAERF 238          
BLAST of EY753372 vs. ExPASy Swiss-Prot
Match: PNO1_DROME (RNA-binding protein pno1 OS=Drosophila melanogaster GN=l(1)G0004 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.400e-64
Identity = 118/179 (65.92%), Postives = 150/179 (83.80%), Query Frame = 2
Query:  179 RVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILXSFANIKIARDSLCSLILGSPAGKVYSKLXAVTAXLAE 715
            R + RKV+V PHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLRL++L++ESFEIKDVKTLRG+H SRAIGRL+GKGG+TKF IEN TKTRIV+ADSKIHIL S+ NI++AR ++C+LILGSP  KVY  L AV + L+E
Sbjct:   60 RSELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSKIHILGSYQNIQLARRAVCNLILGSPPSKVYGNLRAVASRLSE 238          
BLAST of EY753372 vs. ExPASy Swiss-Prot
Match: PNO1_DROPS (RNA-binding protein pno1 OS=Drosophila pseudoobscura pseudoobscura GN=l(1)G0004 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.680e-63
Identity = 116/177 (65.54%), Postives = 149/177 (84.18%), Query Frame = 2
Query:  185 QFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILXSFANIKIARDSLCSLILGSPAGKVYSKLXAVTAXLAE 715
            + RKV+V PHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLRL++L++E+FEIKDVKTLRG+H SRAIGRL+GKGG+TKF IEN TKTRIV+ADSKIHIL S+ NI++AR ++C+LILGSP  KVY  L +V + L+E
Sbjct:   60 ELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDIANLQKGADFVKAFLCGFEVDDALALLRLEDLFVETFEIKDVKTLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSKIHILGSYQNIQLARRAICNLILGSPPSKVYGNLRSVASRLSE 236          
BLAST of EY753372 vs. ExPASy Swiss-Prot
Match: PNO1_CHICK (RNA-binding protein PNO1 OS=Gallus gallus GN=PNO1 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.500e-63
Identity = 121/203 (59.61%), Postives = 156/203 (76.85%), Query Frame = 2
Query:  116 SGSLPPK-PLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILXSFANIKIARDSLCSLILGSPAGKVYSKLXAVTAXLAESF 721
            +G  P K P F PL A  +  G+ + RKV V  +RY+PLK+ WM+I+TPI E +++ IR NLK R VE+KT ++T D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFE+ DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+ADSKIHIL SF NIK+AR ++C+LILGSP  KVY  + AV +  AE F
Sbjct:   40 AGPQPSKRPAFPPLPAAALGVGKGEVRKVPVPANRYTPLKENWMKIFTPIVEHLQLQIRFNLKTRNVEIKTCSETKDLSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADSKIHILGSFQNIKMARTAICNLILGSPPSKVYGNIRAVASRAAERF 242          
BLAST of EY753372 vs. ExPASy Swiss-Prot
Match: PNO1_DANRE (RNA-binding protein PNO1 OS=Danio rerio GN=pno1 PE=2 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 4.571e-63
Identity = 120/209 (57.42%), Postives = 156/209 (74.64%), Query Frame = 2
Query:   98 SQLQNESGSLPPK-PLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILXSFANIKIARDSLCSLILGSPAGKVYSKLXAVTAXLAESF 721
            +Q +  S S P K P F  L   ++ GG  + RKV V  HRY+PLK+ W++I+TPI E +++ +R NLK R+VE+KT  +T DI  L + ADFV AF+LGF V DA+AL+RLDEL++E+F++ DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+AD+KIHIL SF NIK+AR ++C+LILGSP  KVY  L AV    AE F
Sbjct:   44 TQTEESSSSAPVKRPHFPALSGDQLGGGVDEMRKVPVPSHRYTPLKENWLKIFTPIVENLQLQVRFNLKTRQVEIKTCKETQDIGALTRAADFVKAFVLGFQVEDALALIRLDELFLETFDVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADTKIHILGSFQNIKMARTAICNLILGSPPSKVYGNLRAVATRSAERF 252          
BLAST of EY753372 vs. ExPASy Swiss-Prot
Match: PNO1_XENLA (RNA-binding protein PNO1 OS=Xenopus laevis GN=pno1 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 7.798e-63
Identity = 116/204 (56.86%), Postives = 155/204 (75.98%), Query Frame = 2
Query:  113 ESGSLPPK-PLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILXSFANIKIARDSLCSLILGSPAGKVYSKLXAVTAXLAESF 721
            + G  P K P F P+   ++ G + + RK+ V  HRY+PLK+ WM+I+TPI E +++ +R NLK+R VE+KT  +T D+  L K ADFV AF+LGF V DA+AL+RLD+L++ESFE+ DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+ADSKIHI+ SF NIK+AR ++C+LILGSP  KVY  + AV +  A+ F
Sbjct:   33 DMGEQPSKRPDFPPISGDKLMGDKDEMRKIPVPSHRYTPLKENWMKIFTPIVEHLQLQVRFNLKSRNVEIKTCKETTDVGALTKAADFVRAFILGFQVEDALALVRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADSKIHIMGSFQNIKMARTAICNLILGSPPSKVYGNIRAVASRAADRF 236          
BLAST of EY753372 vs. ExPASy Swiss-Prot
Match: PNO1_XENTR (RNA-binding protein PNO1 OS=Xenopus tropicalis GN=pno1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.737e-62
Identity = 116/204 (56.86%), Postives = 154/204 (75.49%), Query Frame = 2
Query:  113 ESGSLPPK-PLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILXSFANIKIARDSLCSLILGSPAGKVYSKLXAVTAXLAESF 721
            ++G  P K P F P+   ++ G + + RKV V  HRY+PLK+ WM+I+TPI E +++ +R NLK R VE+KT  +T D+  L K  DFV AF+LGF V DA+AL+RLD+L++ESFE+ DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+ADSKIHIL SF NIK+AR ++C+LILGSP  KVY  + AV +  A+ F
Sbjct:   33 DTGEQPSKRPDFPPISGDKLMGDKDEMRKVPVPSHRYTPLKENWMKIFTPIVEHLQLQVRFNLKTRNVEIKTCKETTDVGALTKATDFVRAFILGFQVEDALALVRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADSKIHILGSFQNIKMARTAICNLILGSPPSKVYGNIRAVASRAADRF 236          
BLAST of EY753372 vs. ExPASy Swiss-Prot
Match: PNO1_RAT (RNA-binding protein PNO1 OS=Rattus norvegicus GN=Pno1 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.126e-61
Identity = 114/207 (55.07%), Postives = 155/207 (74.88%), Query Frame = 2
Query:  101 QLQNESGSLPPKPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILXSFANIKIARDSLCSLILGSPAGKVYSKLXAVTAXLAESF 721
            ++  E      +P+F PL   ++  G+ + RK+ V  +RY+PLK+ WM+I+TPI E + + IR NLK+R VE++T  DT D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+AD K+HIL SF NIK+AR ++C+LILG+P  KVY  + AV +  A+ F
Sbjct:   42 RMDTEEARPAKRPVFPPLSGDQLLTGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKDTKDVSALTKAADFVKAFVLGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADRF 248          
BLAST of EY753372 vs. ExPASy Swiss-Prot
Match: PNO1_CANAL (Pre-rRNA-processing protein PNO1 OS=Candida albicans GN=PNO1 PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.126e-61
Identity = 126/212 (59.43%), Postives = 156/212 (73.58%), Query Frame = 2
Query:   86 ETVPSQLQNESGSLPPKPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILXSFANIKIARDSLCSLILGSPAGKVYSKLXAVTAXLAESF 721
            ET   QL +ESG    KP F       M   +++ RKV V PHR +PLK +W +IY P+ E +K+ +RMNLK + VEL+T   T D+  LQK ADFV AF LGFDV DAIALLRLD+LYIE+FEIKDVKTL G+HLSRAIGR++GK GKTKFAIENAT+TRIV+ADSKIHIL  F +I++AR+++ SLILGSP GKVY  L  V + + E +
Sbjct:   71 ETTELQL-DESG----KPKFSAASKSNMKV-KLESRKVAVPPHRMTPLKNVWSKIYPPLVEHLKLQVRMNLKTKTVELRTNKYTTDVGALQKGADFVKAFTLGFDVDDAIALLRLDDLYIETFEIKDVKTLTGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMAREAVVSLILGSPPGKVYGNLRTVASRMKERY 276          
BLAST of EY753372 vs. ExPASy Swiss-Prot
Match: PNO1_ORYLA (RNA-binding protein PNO1 OS=Oryzias latipes GN=pno1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.921e-61
Identity = 115/196 (58.67%), Postives = 152/196 (77.55%), Query Frame = 2
Query:  134 KPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILXSFANIKIARDSLCSLILGSPAGKVYSKLXAVTAXLAESF 721
            +P F P+ A ++ G   + RKV V  HRY+PLK+ W++I+TPI E +++ +R NLK R VE+KT  +T DI+ L K ADF+ AF+LGF V DA+AL+RLDEL++ESF++ DVK L+G+HLSRAIGR++GKGGKTKF IEN TKTRIV+AD+KIHIL SF NIK+AR ++C+LILGSP  KVY  + AV +  AE F
Sbjct:   49 RPHFPPISADKLRGPD-EMRKVAVPAHRYTPLKENWLKIFTPIVENLQLQVRFNLKTRNVEIKTCKETQDIAALTKAADFIKAFVLGFQVDDAMALIRLDELFLESFDVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADTKIHILGSFQNIKMARTAICNLILGSPPSKVYGNIRAVASRTAERF 243          
The following BLAST results are available for this feature:
BLAST of EY753372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
PNO1_NEMVE1.421e-6459.69RNA-binding protein pno1 OS=Nematostella vectensis... [more]
PNO1_DROME5.400e-6465.92RNA-binding protein pno1 OS=Drosophila melanogaste... [more]
PNO1_DROPS2.680e-6365.54RNA-binding protein pno1 OS=Drosophila pseudoobscu... [more]
PNO1_CHICK3.500e-6359.61RNA-binding protein PNO1 OS=Gallus gallus GN=PNO1 ... [more]
PNO1_DANRE4.571e-6357.42RNA-binding protein PNO1 OS=Danio rerio GN=pno1 PE... [more]
PNO1_XENLA7.798e-6356.86RNA-binding protein PNO1 OS=Xenopus laevis GN=pno1... [more]
PNO1_XENTR1.737e-6256.86RNA-binding protein PNO1 OS=Xenopus tropicalis GN=... [more]
PNO1_RAT1.126e-6155.07RNA-binding protein PNO1 OS=Rattus norvegicus GN=P... [more]
PNO1_CANAL1.126e-6159.43Pre-rRNA-processing protein PNO1 OS=Candida albica... [more]
PNO1_ORYLA1.921e-6158.67RNA-binding protein PNO1 OS=Oryzias latipes GN=pno... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-A07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753372 ID=EY753372; Name=EY753372; organism=Citrus sinensis; type=EST; length=859bp
AGCTTTTTCCGACATAGAGATCAGGGAGAGAAGCAGCTCGTATCTGATCT
TGTGGTTGTTCACAATGCAGACTTCCATGGACATTGAAACAGTTCCATCT
CAACTGCAAAATGAATCCGGGTCTCTGCCACCAAAGCCCCTGTTTGGGCC
ATTGAAGGCTCATGAAATGTCTGGTGGTCGAGTTCAGTTTCGGAAGGTCA
ATGTTACACCTCATCGGTACTCGCCTCTCAAGAAAATATGGATGGAAATA
TACACTCCAATTTATGAGCAGATGAAGATTGACATCCGTATGAACCTCAA
GGCTCGTAGGGTTGAATTGAAGACTAGAGCAGACACACCCGACATAAGTA
ATCTACAGAAGTGTGCGGATTTTGTTCATGCATTCATGCTTGGTTTTGAT
GTTATCGATGCCATTGCACTTTTGCGTTTGGATGAGCTGTATATAGAATC
TTTTGAGATCAAGGATGTTAAGACACTAAGAGGTGAGCATTTGTCACGTG
CCATAGGAAGATTATCTGGTAAAGGTGGCAAAACAAAGTTTGCTATCGAG
AATGCCACAAAAACAAGGATTGTGATTGCAGATTCNAAAATTCACATACT
ANGATCCTTTGCCAATATTAAAATTGCAAGGGATTCCCTTTGTAGTCTCA
TCTTAGGATCTCCTGCTGGAAAGGTGTATTCAAAACTTANAGCAGTGACT
GCCANATTGGCAGAAAGTTTTGATCATTCTTATTTTTTGTTGGGCATGCA
AGGNTCCTCTATGGTGAGTTTATCTATGACAGTGTAACCTGGTGGNTAGG
ATTTTTGCCGCAAAGTATCAACCCAGTACGTAAATATAGTAGTTTATCAT
TACAGGTTT
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