EY753365

Overview
NameEY753365
Unique NameEY753365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753365 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.701e-75
Identity = 86/116 (74.14%), Postives = 101/116 (87.07%), Query Frame = 3
Query:  213 MAGGNEVNLNESKRVVPLNTWVLISNFKLAYNLLRRPDGTFNRDLAEYLDRKVPPNTIPVDGVFSFDHVDRATGLLNRVFQ-AAPQNEVQWGIVELEKPLSTTEVVPVIIFFHGGS 557
            MAGGNEVNLNE KR+VPLNTWVLISNFKLAY +LRRPDG+FNRDLAE+LDRKVP N+ P+DGVFSFDHVD  T LL R++Q A+  ++ + G +EL KPLSTTE+VPV+IFFHGGS
Sbjct:    1 MAGGNEVNLNECKRIVPLNTWVLISNFKLAYKVLRRPDGSFNRDLAEFLDRKVPANSFPLDGVFSFDHVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGS 116          

HSP 2 Score: 123.25 bits (308), Expect = 4.701e-75
Identity = 63/84 (75.00%), Postives = 66/84 (78.57%), Query Frame = 2
Query:  557 FTHSSANSAIYDTFCRRLVNICKAVVVSVNXRRSPEYRYPCAYDDGWAALKWVK*EL-ASE*KDF*VYVYLAGDSSGWYIAHMV 805
            FTHSSANSAIYDTFCRRLV IC  VVVSV+ RRSPE+RYPCAYDDGW AL WVK  +     KD  VYVYLAGDSSG  IAH V
Sbjct:  117 FTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNVYVYLAGDSSGGNIAHNV 200          
BLAST of EY753365 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.957e-62
Identity = 79/116 (68.10%), Postives = 90/116 (77.59%), Query Frame = 3
Query:  213 MAGGNEVNLNESKRVVPLNTWVLISNFKLAYNLLRRPDGTFNRDLAEYLDRKVPPNTIPVDGVFSFD-HVDRATGLLNRVFQAAPQNEVQWGIVELEKPLSTTEVVPVIIFFHGGS 557
            MAG  EVNL ESK VVPLNTWVLISNFKLAYNLLRRPDGTFNR LAE+LDRKVP N  PV+GVFSFD  +DR T LL+RV++ A        I +L+ P+   E+VPVI+FFHGGS
Sbjct:    1 MAGSEEVNLIESKTVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAG-TSPSITDLQNPVD-GEIVPVIVFFHGGS 114          

HSP 2 Score: 112.849 bits (281), Expect = 2.957e-62
Identity = 60/94 (63.83%), Postives = 68/94 (72.34%), Query Frame = 2
Query:  557 FTHSSANSAIYDTFCRRLVNICKAVVVSVNXRRSPEYRYPCAYDDGWAALKWVK*E--LASE*KDF*VYVYLAGDSSGWYIAHMVR*GXLKQRL 832
            F HSSANSAIYDT CRRLV +C AVVVSVN RR+PE RYPCAYDDGWA LKWV     L S+ KD  V ++LAGDSSG  I H V    ++ R+
Sbjct:  115 FAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSSWLRSK-KDSKVRIFLAGDSSGGNIVHNVAVRAVESRI 207          
BLAST of EY753365 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.140e-61
Identity = 77/117 (65.81%), Postives = 93/117 (79.49%), Query Frame = 3
Query:  213 MAGGNEVNLNESKRVVPLNTWVLISNFKLAYNLLRRPDGTFNRDLAEYLDRKVPPNTIPVDGVFSFD-HVDRATGLLNRVFQAAPQNEVQ-WGIVELEKPLSTTEVVPVIIFFHGGS 557
            MA  +EVNL ES+ VVPLNTWVLISNFK+AYN+LRRPDGTFNR LAEYLDRKV  N  PVDGVFSFD  +DR   LL+RV++ A  ++ Q   I++LEKP+   ++VPVI+FFHGGS
Sbjct:    1 MAASDEVNLIESRTVVPLNTWVLISNFKVAYNILRRPDGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVD-GDIVPVILFFHGGS 116          

HSP 2 Score: 111.694 bits (278), Expect = 7.140e-61
Identity = 58/85 (68.24%), Postives = 64/85 (75.29%), Query Frame = 2
Query:  557 FTHSSANSAIYDTFCRRLVNICKAVVVSVNXRRSPEYRYPCAYDDGWAALKWVK*E--LASE*KDF*VYVYLAGDSSGWYIAHMV 805
            F HSSANSAIYDT CRRLV +CK VVVSVN RR+PE  YPCAYDDGW AL WV     L S+ KD  V+++LAGDSSG  IAH V
Sbjct:  117 FAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSK-KDSKVHIFLAGDSSGGNIAHNV 200          
BLAST of EY753365 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.091e-55
Identity = 69/123 (56.10%), Postives = 88/123 (71.54%), Query Frame = 3
Query:  213 MAGGNEVNLNESKRVVPLNTWVLISNFKLAYNLLRRPDGTFNRDLAEYLDRKVPPNTIPVDGVFSFDH-VDRATGLLNRVFQAAPQNEVQWGIVELEKPL-------STTEVVPVIIFFHGGS 557
            MAG +EVN NE K VVPL+TWVLISNFKL+YN+LRR DGTF RDL EYLDR+VP N  P++GV SFDH +D++ GL  R+++AA + + + G   + +P+          E  PVIIFFHGGS
Sbjct:    1 MAGSDEVNRNECKTVVPLHTWVLISNFKLSYNILRRADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGS 123          

HSP 2 Score: 101.293 bits (251), Expect = 1.091e-55
Identity = 51/84 (60.71%), Postives = 59/84 (70.24%), Query Frame = 2
Query:  557 FTHSSANSAIYDTFCRRLVNICKAVVVSVNXRRSPEYRYPCAYDDGWAALKWVK*E-LASE*KDF*VYVYLAGDSSGWYIAHMV 805
            F HSSA+S IYD+ CRR V + K VVVSVN RR+PE+RYPCAYDDGW ALKWV  +       D    V+L+GDSSG  IAH V
Sbjct:  124 FVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHV 207          
The following BLAST results are available for this feature:
BLAST of EY753365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
GI1L2_ARATH4.701e-7574.14Probable gibberellin receptor GID1L2 OS=Arabidopsi... [more]
GI1L3_ARATH2.957e-6268.10Probable gibberellin receptor GID1L3 OS=Arabidopsi... [more]
GI1L1_ARATH7.140e-6165.81Probable gibberellin receptor GID1L1 OS=Arabidopsi... [more]
GID1_ORYSJ1.091e-5556.10Gibberellin receptor GID1 OS=Oryza sativa subsp. j... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753365 ID=EY753365; Name=EY753365; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGAAAAAAATGAGACACTGCTAACACAGTGAGTGAAAGAAA
TAGGCTGTGTTCATCTTGCTTGATTATATTGTAAAGATTTTACAATTCCA
CAAGTTTTACCTCGAATTAATTATTATGAGGTTGCTGCTTCTTTGAAGAC
ACACATTTGAGTTCTGGGTTATTTTTAAGGCTTTGTTCCCTCTTCTTGGG
TTAGTTTCGGCCATGGCTGGTGGTAATGAAGTCAACCTCAATGAATCTAA
GAGGGTTGTTCCTTTAAATACATGGGTCCTCATTTCCAATTTCAAGCTAG
CTTACAATCTCCTGCGTCGGCCTGATGGAACTTTTAACCGGGACTTGGCT
GAGTACCTTGACCGGAAAGTCCCACCCAATACTATTCCTGTTGATGGGGT
TTTCTCCTTTGATCATGTTGACCGAGCCACGGGTCTTCTCAACAGGGTTT
TCCAGGCTGCCCCGCAAAATGAGGTTCAGTGGGGCATTGTAGAGCTTGAA
AAGCCTTTGAGTACCACTGAGGTTGTCCCCGTTATAATCTTTTTCCATGG
TGGAAGTTCACTCATTCTTCTGCGAACAGTGCTATCTATGATACCTTCTG
CCGCCGCCTTGTTAACATTTGCAAGGCCGTTGTGGTCTCTGTAAATNATC
GCCGATCACCTGAGTATAGGTATCCATGTGCTTACGATGATGGGTGGGCT
GCTCTTAAGTGGGTAAAATAAGAACTTGCTTCAGAGTGAAAAGATTTCTA
AGTCTATGTTTATTTGGCCGGTGATAGTTCTGGGTGGTATATAGCACACA
TGGTGCGGTGAGGCCANCTGAAACAAAGGTTGAAATATGGGTAATATCCT
CCTTCTTCATTGTTGGGGGGAAAAAGAAACTTGAT
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