EY753364

Overview
NameEY753364
Unique NameEY753364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1453 contig Csv1_Contig1453:1276..2122. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY753364 vs. ExPASy Swiss-Prot
Match: ESYT1_PONAB (Extended synaptotagmin-1 OS=Pongo abelii GN=ESYT1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 45/127 (35.43%), Postives = 69/127 (54.33%), Query Frame = -1 
Query:  321 VLSVTVILAENLPASD------LMGKADPYVVLTMKKSEPRNKTRVVNDCLNPIWNQTFDFVVEDGLHDMLIAEVWDHDTFGKDYMGRCILTLTRVILEGEYTDCFELDGTKSGKLKLHLKWM-PQP 680
            VL + V+ A++L A D      + GK+DPYV L +     R+   VV + LNP WN+ F+ +V       L  EV+D D    D++GRC ++LT V+  G   +   L+   SG+L L L+ + P+P
Sbjct:  648 VLRIHVLEAQDLIAKDRFLGGLVKGKSDPYVKLKLAGRSFRS--HVVREDLNPRWNEVFEVIVTSVPGQELEVEVFDKDLDKDDFLGRCKVSLTTVLNSGFLDEWLTLEDVPSGRLHLRLERLTPRP 772
The following BLAST results are available for this feature:
BLAST of EY753364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ESYT1_PONAB6.845e-1135.43Extended synaptotagmin-1 OS=Pongo abelii GN=ESYT1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753364 ID=EY753364; Name=EY753364; organism=Citrus sinensis; type=EST; length=854bp
GGCGCCCTTTTTTTTTTTTTTTTTTTTTTTTGGTGCAATATTTGCAAGCT
ACATTGACATATATGGAGAAATGCCACGTTACATATTACAACCACCTTTG
AAAATGATTTGCATCTGCTTCACAGATTTTATTCTATAAACCGTACATCA
GACGCAGAGCATCAAATAAAAACCTCACAAATATCTGGTCCTCTCTTTTC
CCTAAAGAATTATCTATGATGCTTGAACAACAGCGTGATAGCTTGGGAAT
CTTCTGTTGGCTACAAAATCATGTAGTATTTCAGATTCGCGTTGGTTTTC
ACTCAGGTATCGCGATAAATAGGCTGCGGCATCCACTTGAGGTGCAACTT
TAATTTTCCTGATTTAGTTCCATCAAGCTCAAAGCAGTCTGTGTATTCTC
CTTCCAATATAACCCTTGTCAATGTCAAGATGCATCGTCCCATGTAGTCC
TTCCCAAATGTGTCATGATCCCATACTTCAGCAATTAGCATGTCATGCAA
TCCATCCTCAACAACAAAGTCAAAAGTTTGATTCCAAATTGGATTCAGGC
AGTCATTCACAACTCTAGTTTTGTTTCTTGGCTCTGATTTCTTCATAGTG
AGCACCACATAGGGATCAGCCTTCCCCATCAAATCTGATGCAGGCAAGTT
TTCAGCTAATATTACCGTAACAGAAAGTACTCCTCTAATAATAACCTCTC
TTCTCTTCTGAGAAGCATCTTTTTCAAGTTCATAGCTTCTGTTCCATTTG
CCCCACTTTTAGAGCCTTCTCCCCATTTGTAAGACCTTTTNCAAGGAGGT
CATGAAAATTGGGCGCAAAGGGTTTGTAAACCATTCTTCATCCAAATGGC
AGTA
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