EY753334

Overview
NameEY753334
Unique NameEY753334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1824 contig Csv1_Contig1824:129..994. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753334 vs. ExPASy Swiss-Prot
Match: NAC8_ARATH (NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.758e-100
Identity = 171/238 (71.85%), Postives = 195/238 (81.93%), Query Frame = 2
Query:   14 ASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKPEKTNWVMHQYHLGTEEDEKDDNYVISKIFYQQQQ---AKYGDKIEQDILEST-GAIISKVDPVTPKSVTPDP 715
            AS + DP +V WKSNP++ CP C HVIDNSDV  +WPGLPRGVKFDPSD EIIWHLLAK+GL GL+ HPFIDEFIPTV+QD GICYTHP+NLPGVK DG+ +HFF++AIKAYSTGTRKRRKI+ DDFG+VRWHKTGRTKPV+LDGVQ+GCKKIMVLY     GGK  KTNWVMHQYHLG EEDEK+ +YV+SKIFYQQ Q    K GDK EQ++ E    A+    DPVTPK  TP+P
Sbjct:   20 ASASSDPRQVVWKSNPSRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFGDVRWHKTGRTKPVVLDGVQRGCKKIMVLY-----GGKAVKTNWVMHQYHLGIEEDEKEGDYVVSKIFYQQPQQLVVKRGDKAEQEVSEDIFAAVTPTADPVTPKLATPEP 252          
BLAST of EY753334 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.695e-12
Identity = 55/194 (28.35%), Postives = 89/194 (45.88%), Query Frame = 2
Query:  131 PRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPG---VKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQK---GCKKIMVLYMSMVRGGKPEKTNWVMHQYHLGTEEDEKDDNYVISKIFYQQQQAKYGDKIEQDILESTGAIISKVDPVTP 694
            P G +F P+D+EI+ H L    L+    H  +DE I TVD    IC   P +LP    +K      +FF      Y+ G ++RR+ N        W KTG+T  VM     +   G K+++V      +     KT+WVMH+YH  +    +   Y + K+ ++ ++ +           STG+ I ++  + P
Sbjct:    4 PVGFRFRPNDEEIVDHYLRPKNLDSDTSH--VDEVISTVD----ICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGF-----WKKTGKTMTVMRKRGNREKIGEKRVLVF-----KNRDGSKTDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETEISS-------SSTGSEIEQIHSLIP 174          
The following BLAST results are available for this feature:
BLAST of EY753334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NAC8_ARATH2.758e-10071.85NAC domain-containing protein 8 OS=Arabidopsis tha... [more]
NAC4_ARATH3.695e-1228.35NAC domain-containing protein 4 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-F03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753334 ID=EY753334; Name=EY753334; organism=Citrus sinensis; type=EST; length=864bp
CCACGCGTCCGGTGCATCTGGCACAGGTGATCCGGAAAGAGTTAAATGGA
AGAGCAATCCTACAAAAGCTTGTCCCAATTGTCACCATGTCATCGACAAC
AGTGATGTTGCTCACGAGTGGCCAGGATTACCCAGGGGTGTGAAATTTGA
CCCATCTGATCAAGAAATTATATGGCATTTACTTGCAAAAGCTGGTTTGG
AAGGCTTGAATCCCCATCCATTTATTGATGAGTTCATCCCAACTGTTGAT
CAAGATGGTGGAATCTGTTACACCCATCCTCAGAATTTGCCAGGTGTTAA
GCAAGATGGAAGTGCAGCACACTTCTTTTATAGAGCTATCAAGGCTTACA
GTACTGGAACTCGAAAGCGTAGAAAGATAAATGGTGATGATTTTGGTGAG
GTGCGCTGGCACAAGACTGGCAGGACTAAACCAGTGATGTTAGATGGGGT
TCAAAAAGGGTGTAAGAAGATTATGGTTCTCTATATGAGCATGGTCAGGG
GAGGGAAACCTGAGAAAACTAATTGGGTGATGCACCAGTATCACTTGGGA
ACAGAGGAGGATGAAAAGGATGACAACTATGTTATATCTAAAATATTTTA
TCAGCAGCAACAGGCCAAGTATGGTGATAAAATTGAACAAGATATTCTTG
AAAGCACTGGTGCCATCATTTCCAAAGTAGATCCAGTCACTCCTAAGTCA
GTGACTCCAGACCCACCTNGTACTGAAAAGCATCCTGATTTTGGCCACGA
NCAGAGTCTCCTACTACAGATGCATTTGATCAGCAATCTGAAATAAGCAT
GTGGAAGAGGTTCAACCTTTATGTAAAACCCCGGTTCTATGATAAAATCG
AAGCAAAAATCATG
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