EY753328

Overview
NameEY753328
Unique NameEY753328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9358 contig Csv1_Contig9358:278..1135. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753328 vs. ExPASy Swiss-Prot
Match: HDHD3_MOUSE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus GN=Hdhd3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.742e-14
Identity = 58/196 (29.59%), Postives = 87/196 (44.39%), Query Frame = 3
Query:   27 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDG---RPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVGDDRRNDVWGCQ 584
            + L  D   TL+   +P+ + Y      +GV   +  +   +R+AY           ++ G   R +W+ +V  +    G  D+Q      ++LY  +++   W + +  AE   K  RK G+KLAVVSNFD RL  +L  L     FD           KP+P IF +A     V+P  A HVGD    D  G Q
Sbjct:    8 RLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRGLTSRQWWKDVVLHTFRLAGVPDAQAMTPVADQLYEDFSSPFTWQVLEG-AEMTLKGCRKRGLKLAVVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQRACVEPAVAAHVGDSYLCDYQGSQ 202          
BLAST of EY753328 vs. ExPASy Swiss-Prot
Match: HDHD3_XENLA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.544e-13
Identity = 61/190 (32.11%), Postives = 86/190 (45.26%), Query Frame = 3
Query:   42 DAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDG-------RPFWQFIVSSS---TGCSDSQYFE----ELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVGDDRRND 569
            D   TLL    P+ Q Y    +K G+  +   +   +R AY      SRL + N G       R +W  +V  +   +G  DS   +    +LY  ++T   W L  P A +   +    G+++AV+SNFD RL  +LR    + +FD           KP+  IF KA  L  V P  AVHVGDD  ND
Sbjct:    9 DVKDTLLRVRVPVGQQYYAEAKKRGLCVNPGTLETSFRNAYRSH---SRL-FPNYGLAQGMSSRQWWLDVVLQTFRLSGIEDSDTVQSLAKQLYQDFSTAHNWALV-PGAREALDSCTNLGLRMAVISNFDRRLEELLRQCCLERYFDFVVTAESAGVAKPHLGIFHKALSLAKVPPHQAVHVGDDYVND 193          
BLAST of EY753328 vs. ExPASy Swiss-Prot
Match: HDHD3_BOVIN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus GN=HDHD3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12
Identity = 54/196 (27.55%), Postives = 85/196 (43.37%), Query Frame = 3
Query:   27 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYE---QPWGGSRLRYVNDGRPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVGDDRRNDVWGCQ 584
            + L  D   TLL    P+   Y      +G+      +   +++AY+   Q +    L +      +W  +V  +    G  D+Q      E+LY  +++   W + +  AE   +  RK G+KLAVVSNFD RL  +L  +     FD           KP+P IF +A  L  V+P    H+GD  + D  G +
Sbjct:    8 RLLTWDVKDTLLRLRHPVGVEYATKARAHGLEVEATALGQAFKQAYKAQSQSFPNYGLGHGLTSHQWWLDLVQQTFHQAGVRDAQAVAPIAEQLYKDFSSPSTWQVLEG-AEATLRGCRKRGLKLAVVSNFDRRLEDILEGVGLREHFDFVLTSEAAGWPKPDPRIFHEALHLAQVEPAVGAHIGDSYQRDYKGAR 202          
BLAST of EY753328 vs. ExPASy Swiss-Prot
Match: HDHD3_HUMAN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Homo sapiens GN=HDHD3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12
Identity = 55/194 (28.35%), Postives = 84/194 (43.30%), Query Frame = 3
Query:   27 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYE---QPWGGSRLRYVNDGRPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVGDDRRNDVWG 578
            + L  D   TLL    P+ + Y      +G+    + +   +R+AY      +    L +    R +W  +V  +    G  D+Q      E+LY  ++    W + D  AE   +  R  G++LAV+SNFD RL  +L  L     FD           KP+P IF +A  L  ++P  A HVGD+   D  G
Sbjct:    8 RLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDG-AEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQG 200          
The following BLAST results are available for this feature:
BLAST of EY753328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
HDHD3_MOUSE8.742e-1429.59Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_XENLA2.544e-1332.11Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_BOVIN1.262e-1227.55Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_HUMAN4.797e-1228.35Haloacid dehalogenase-like hydrolase domain-contai... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-E06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753328 ID=EY753328; Name=EY753328; organism=Citrus sinensis; type=EST; length=861bp
CCACGCGTCCGGGAGAAATCACACATAAAGCTTTGCTCGTTGACGCTGCT
GGTACTCTCCTTGTTCCTTCTCAGCCCATGGCCCAGATATATAGAGAGAT
TGGAGAGAAGTATGGTGTTGCCTACTCTGAGGCGGAGATATTGAACAGAT
ACAGAAGGGCTTATGAGCAGCCATGGGGAGGATCTCGTCTCAGATATGTG
AATGATGGGAGACCCTTCTGGCAATTTATAGTTAGTTCGTCTACTGGTTG
TTCAGATTCCCAGTATTTTGAAGAACTATATAACTACTATACCACTGAAA
AGGCATGGCACCTCTGTGATCCTGAAGCTGAAAAGGTATTTAAGGCTATC
AGAAAAGCAGGAGTCAAATTGGCTGTTGTGTCAAACTTTGATACTCGGTT
AAGACCTGTGTTGCGAGCTCTAAATTGTGATCATTGGTTCGATGCTGTTG
CAGTGTCAGCTGAAGTTGAAGCAGAGAAGCCAAATCCAACAATATTCCTA
AAAGCTTGTGATTTGTTGGGAGTAAAACCTGANGATGCTGTACATGTAGG
GGATGATCGTAGGAATGATGTGTGGGGGTGCCAGGGATGCAGGTTGTGAT
GCTTGGCTTTGGGGAAGTGATGTCCACTCCTTTAAGGAGGTTGCTCAAAG
GATANGGGTCAAAGTTTTAGGAGAAGGCCGATCTAAACCGACCGCTCAGA
AGAATGCTTTATGTACAGGTTTGTTTTACCTTTTGGTGAGAGATCTGTGT
TTATTCTGCATCGGACGGATGGGGAACAGACTANATTGGACTGTTGGTAA
GAAAAAAACTTCAGCTTGGTTATGTAATAAAATATTAACAATTTCACCAT
CCAACTGAGAA
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