GE213157

Overview
NameGE213157
Unique NameGE213157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7629 contig Csv1_Contig7629:90..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213157 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.911e-94
Identity = 173/229 (75.55%), Postives = 197/229 (86.03%), Query Frame = 1
Query:   25 YIGKFIVEASAKAGLPTFVLVRESTLSDPSKSQLLDHFKKLGVNIVTGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAPIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGASNFFAAYFLPNLSQPGATAPPRDKVVILSDGNPKAVYNKEDDIGTYSIKAVDDPRPLNKILYIKPPGNIYSFNDLVSLRERKMGKTLQRVYL 711
            YIGKFIVEASAKAG  TFVLVRESTLS+P+K++L+D FK  GV  V GD+ +HESLVKAIKQVDVVISTVGH LL DQVK+IA IKEAGN+KRFFPSEFGNDVDRVHAVEPAK+AF TKA+IRR VEAEGIP+TY A+ FFA Y LPNL+QPGA  PP DKVVIL  GN KAV+NKE+DIGTY+I AVDDP+ LNKILYIKPP NI + N+LVSL E+K GK L+R+Y+
Sbjct:   15 YIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFVHGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVHAVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGHGNTKAVFNKEEDIGTYTINAVDDPKTLNKILYIKPPHNIITLNELVSLWEKKTGKNLERLYV 243          
BLAST of GE213157 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.361e-82
Identity = 151/232 (65.09%), Postives = 181/232 (78.02%), Query Frame = 1
Query:   25 YIGKFIVEASAKAGLPTFVLVRESTLSDPSKSQLLDHFKKLGVNIVTGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAPIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGASNFFAAYFLPNLSQPGATAPPRDKVVILSDGNPKAVYNKEDDIGTYSIKAVDDPRPLNKILYIKPPGNIYSFNDLVSLRERKMGKTLQRVYLGRD 720
            YIGK++VE SAK+G PTF L+RESTL +P KS+L+D FK  GV ++ GD+ N ESL+KAIKQVDVVISTVG     DQV II  IKEAGNIKRF PSEFG DVD   A+EPA S FA K +IRR +EAEGIPYTY   N+FA +FLPNL Q  A  PPRDKVVI  DGNPKA+Y KE+DI TY+I+AVDDPR LNK L+++PP NI SFN++VSL E K+GKTL+++YL  +
Sbjct:   17 YIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHARAIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGDGNPKAIYVKEEDIATYTIEAVDDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGKTLEKLYLSEE 248          
BLAST of GE213157 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.692e-81
Identity = 155/231 (67.10%), Postives = 181/231 (78.35%), Query Frame = 1
Query:   25 YIGKFIVEASAKAGLPTFVLVRESTLSDPSKSQLLDHFKKLGVNIVTGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAPIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGASNFFAAYFLPNLSQ--PGATAPPRDKVVILSDGNPKAVYNKEDDIGTYSIKAVDDPRPLNKILYIKPPGNIYSFNDLVSLRERKMGKTLQRVYL 711
            YIGKF+VEASAKAG  TF LVRE+TLSDP K + +  FK LGV I+ GD+ +HESLVKAIKQVDVVISTVG   + DQ KII+ IKEAGN+KRF PSEFG DVDR  AVEPAKSAFA K +IRR +EAEGIPYTY  +  F  Y+LP L Q  PG T+PPRDKV IL DGN KAV NKE+DI  Y+IKAVDDPR LNKILYIKP  N  S N++V+L E+K+GK+L++ +L
Sbjct:   16 YIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRTSAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSLEKTHL 246          
BLAST of GE213157 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.174e-65
Identity = 131/246 (53.25%), Postives = 168/246 (68.29%), Query Frame = 1
Query:   16 PGRYIGKFIVEASAKAGLPTFVLVRES-----------TLSDPSKSQLLDHFKKLGVNIVTGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAPIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGASNFFAAYFLPNLSQPGATAPPRDKVVILSDGNPKAVYNKEDDIGTYSIKAVDDPRPLNKILYIKPPGNIYSFNDLVSLRERKMGKTLQRVYLGRD 720
            P   IG+ +V AS KAG PT+ L+R++             +  SK +LL  FK  GV ++ GD+ +HE+LVKAIKQVD VI T G  L+ DQVKII  IKEAGN+KRFFPSEFG DVDR  AV+P +  F  KA IRR VEAEG+PYTY   + F  YFL NL+Q  AT PPRDKV+IL DGN K  Y  E D+GTY+I+A +DPR LNK ++I+ P N  + N++VSL E+K+GKTL++ Y+  +
Sbjct:   12 PTGAIGRHVVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELLQSFKAAGVILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDVDRHDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFDATEPPRDKVIILGDGNVKGAYVTEADVGTYTIRAANDPRTLNKAVHIRLPHNYLTSNEVVSLWEKKIGKTLEKSYISEE 257          
BLAST of GE213157 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.844e-65
Identity = 127/246 (51.63%), Postives = 172/246 (69.92%), Query Frame = 1
Query:   16 PGRYIGKFIVEASAKAGLPTFVLVRES----------TLSDP-SKSQLLDHFKKLGVNIVTGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAPIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGASNFFAAYFLPNLSQPGATAPPRDKVVILSDGNPKAVYNKEDDIGTYSIKAVDDPRPLNKILYIKPPGNIYSFNDLVSLRERKMGKTLQRVYLGRD 720
            P   IG+ IV AS KAG PT+ LVR++          T ++P +K +L+D+++ LGV ++ GD+ +HE+LVKAIKQVD+VI   G  L+ DQVKII  IKEAGN+K+FFPSEFG DVDR  AVEP +  F  KA IRR +EAEG+PYTY   + F  YFL NL+Q   T PPRDKVVIL DGN K  Y  E D+GT++I+A +DP  LNK ++I+ P N  + N++++L E+K+GKTL++ Y+  +
Sbjct:   12 PTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHEAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPENYLTQNEVIALWEKKIGKTLEKTYVSEE 257          
BLAST of GE213157 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.079e-64
Identity = 123/229 (53.71%), Postives = 158/229 (69.00%), Query Frame = 1
Query:   25 YIGKFIVEASAKAGLPTFVLVRESTLSDPSKSQLLDHFKKLGVNIVTGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAPIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGASNFFAAYFLPNLSQPGATAPPRDKVVILSDGNPKAVYNKEDDIGTYSIKAVDDPRPLNKILYIKPPGNIYSFNDLVSLRERKMGKTLQRVYL 711
            Y+G+ +V ASA+ G PT  LVR++  SDP+K+ LL  F+  GV ++ GD+ +  SLV A+K  DVVIS +G   + DQ +++  IKEAGN+KRFFPSEFG DVDR   VEPAKS    K  IRRA EA GIPYTY  + FFA + LP + Q  A  PP DK V+L DG+ KAV+ +E DI TY++ A DDPR  NK+LYIKPP N  S N+L+SL E+K GKT +R Y+
Sbjct:   16 YLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYV 244          
BLAST of GE213157 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.534e-63
Identity = 123/242 (50.83%), Postives = 166/242 (68.60%), Query Frame = 1
Query:   28 IGKFIVEASAKAGLPTFVLVREST-----------LSDPSKSQLLDHFKKLGVNIVTGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAPIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGASNFFAAYFLPNLSQPGATAPPRDKVVILSDGNPKAVYNKEDDIGTYSIKAVDDPRPLNKILYIKPPGNIYSFNDLVSLRERKMGKTLQRVYLGRD 720
            IG+ IV AS KAG PT+ LVR+++            +  +K +LL +++  GV ++ GD+ +HE+LV AIKQVD VI   G  L+ DQVK+I  IKEAGN+KRFFPSEFG DVDR  AVEP +  F  KA IRR VE+EG+PYTY   + F  YFL NL+Q  AT PPRDKVVIL DGN +  Y  E D+GTY+I+A +DP  LNK ++I+ P N  + N++++L E+K+GKTL++ Y+  +
Sbjct:   16 IGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELLKNYQASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDVDRHDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDKVVILGDGNVRGAYVTEADVGTYTIRAANDPNTLNKAVHIRLPNNYLTANEVIALWEKKIGKTLEKTYVSEE 257          
BLAST of GE213157 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.334e-51
Identity = 110/233 (47.21%), Postives = 148/233 (63.52%), Query Frame = 1
Query:   25 YIGKFIVEASAKAGLPTFVLVRESTLSDPSKSQLLDHFKKLGVNIVTGDVLNHESLVKAIKQVDVVISTVG------HTLLGDQVKIIAPIKEAGNIKRFFPSEFGNDVDRV-HAVEPAKSAFATKAKIRRAVEAEGIPYTYGASNFFAAYFLPNLSQPGATAPPRDKVVILSDGNPKAVYNKEDDIGTYSIKAVDDPRPLNKILYIKPPGNIYSFNDLVSLRERKMGKTLQR 702
            Y+G+ IV+AS + G  TF+L R     D  K Q+L  FKK G  +V     +H+SLV A+K VDVVI T+       H LL  Q+K++  IK+AGNIKRF PSEFG D   + HA+EP +  F  K  +R+A+E   IP+TY ++N FA YF  NLSQ     PPRDKV++  DGN K VY  EDD+ TY+IK +DDPR LNK +Y++PP NI +  +L+   E  +GK L++
Sbjct:   14 YVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVEASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLL-TQLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTHKELIEKWEELIGKQLEK 245          
BLAST of GE213157 vs. ExPASy Swiss-Prot
Match: IGS1_PETHY (Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.580e-50
Identity = 109/230 (47.39%), Postives = 146/230 (63.48%), Query Frame = 1
Query:   25 YIGKFIVEASAKAGLPTFVLVRE-STLSDPSKSQLLDHFKKLGVNIVTGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAPIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGASNFFAAYFLPNLSQPGATAPPRDKVVILSDGNPKAVYNKEDDIGTYSIKAVDDPRPLNKILYIKPPGNIYSFNDLVSLRERKMGKTLQRVYL 711
            Y+GK++V+AS   G PT+  V      SD SK QLL  F+ LGV I  G++  H+ LV   K+VD+VIST+      +Q+K+I  IKEAGNIKRF PSEFGN+VDRV A+   ++    K KIRRA EA GIP+T+ ++N   AYF+  L  P   +   ++V I   G+ KAV N E+D+  Y+IKA DDPR  N++L IKPP NI S  DLVS  E+  G TL+  ++
Sbjct:   16 YLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYGELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVRALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKS---EQVTIYGSGDAKAVLNYEEDVAAYTIKAADDPRAANRVLIIKPPKNIVSQLDLVSSWEKTTGSTLKMTHI 242          
BLAST of GE213157 vs. ExPASy Swiss-Prot
Match: EGS1_OCIBA (Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.260e-46
Identity = 98/229 (42.79%), Postives = 145/229 (63.32%), Query Frame = 1
Query:   25 YIGKFIVEASAKAGLPTFVLVRESTLSDPSKSQLLDHFKKLGVNIVTGDVLNHESLVKAIKQVDVVISTVGHTLLGDQVKIIAPIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYGASNFFAAYFLPNLSQPGATAPPRDKVVILSDGNPKAVYNKEDDIGTYSIKAVDDPRPLNKILYIKPPGNIYSFNDLVSLRERKMGKTLQRVYL 711
            YIG  +V+ S K G PT+V  R ++    SK+ LLD F+ LG  IV G++  HE LV+ +K+VDVVIS +    + DQ KI+  IK AGNIKRF PS+FG + DR++A+ P ++    K  IRRA+E   IPYTY ++N FA+YF+  L +P     P+D++ +   G  K   N E DIG Y+IK   DPR LN+++  +P  NI +  +L+S  E+K+GK  +++++
Sbjct:   18 YIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHV 239          
The following BLAST results are available for this feature:
BLAST of GE213157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IFRH_SOLTU2.911e-9475.55Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_TOBAC4.361e-8265.09Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IFRH_ARATH3.692e-8167.10Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFR_CICAR2.174e-6553.25Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFR_MEDSA4.844e-6551.63Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFRH_MAIZE1.079e-6453.71Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFR_PEA4.534e-6350.83Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFRH_LUPAL2.334e-5147.21Isoflavone reductase homolog OS=Lupinus albus PE=2... [more]
IGS1_PETHY2.580e-5047.39Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 P... [more]
EGS1_OCIBA2.260e-4642.79Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC20 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>GE213157 ID=GE213157; Name=GE213157; organism=Citrus sinensis; type=EST; length=728bp
ATTTCGAGCGGCCGCCCGGGTAGGTACATCGGCAAATTCATCGTCGAAGC
GAGCGCGAAAGCCGGCCTCCCGACGTTCGTGCTCGTGAGAGAATCCACAC
TCTCCGATCCTTCCAAATCTCAGCTCCTCGATCACTTCAAAAAACTCGGC
GTCAATATCGTCACCGGAGATGTGTTGAATCACGAGAGCTTGGTGAAGGC
GATAAAACAAGTGGACGTGGTGATATCAACGGTCGGTCACACTTTATTAG
GTGATCAGGTCAAGATTATTGCGCCCATTAAAGAAGCTGGTAACATTAAG
AGATTCTTCCCTTCAGAATTTGGGAATGATGTTGATCGAGTCCATGCCGT
TGAGCCAGCAAAATCAGCATTTGCCACAAAAGCAAAAATCCGCCGAGCCG
TTGAGGCTGAAGGGATTCCGTATACTTATGGAGCGTCGAATTTCTTTGCG
GCTTACTTCCTTCCCAATTTGTCGCAGCCCGGGGCCACTGCCCCACCGAG
GGATAAAGTTGTCATCTTAAGCGATGGAAATCCAAAAGCCGTTTATAACA
AGGAAGATGATATTGGAACCTATTCTATCAAAGCGGTTGATGATCCCAGA
CCCTTGAACAAAATCCTTTACATTAAACCCCCTGGTAATATTTACTCATT
CAATGATCTTGTGTCCTTGCGGGAGAGAAAGATGGGCAAAACCCTCCAAA
GGGTGTACCTCGGCCGCGACCACGCTAA
back to top