FK826754

Overview
NameFK826754
Unique NameFK826754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length254
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1158 contig Csv1_Contig1158:350..603. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.253e-33
Identity = 67/83 (80.72%), Postives = 74/83 (89.16%), Query Frame = -2
Query:    2 NIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTL 250
            NI+LSPSA VLN GQ +YEGTKAYR E+G++LLFRPD NA RMK+GAERM MPSPSVDQFV+AVKQ ALANKRWVPP GKGTL
Sbjct:   92 NIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTL 174          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.690e-31
Identity = 62/83 (74.70%), Postives = 72/83 (86.75%), Query Frame = -2
Query:    2 NIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTL 250
            NIEL+P+A +LN GQG+ EG KAYR EDGR+LLFRP+LNA RMKIGAERMCM SPSV QF++ VKQ  LAN+RWVPPPGKG+L
Sbjct:   88 NIELNPAAGILNYGQGLIEGMKAYRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKGSL 170          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.386e-31
Identity = 60/84 (71.43%), Postives = 73/84 (86.90%), Query Frame = -2
Query:    2 ANIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTL 253
            A+++L+P AAVL  GQG+YEG KAYRTEDGRILLFRPD N  R++ GA+R+ MP PSVDQFV A+KQ+ALANK+W+PPPGKGTL
Sbjct:   55 ADLQLNPCAAVLQYGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANKKWIPPPGKGTL 138          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.099e-30
Identity = 58/83 (69.88%), Postives = 72/83 (86.75%), Query Frame = -2
Query:    2 NIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTL 250
            NI+++P+A VLN GQG++EG KAYR +DG ILLFRP+ NA RM+ GAERMCMPSP+V+QFV+AVK   LANKRW+PPPGKG+L
Sbjct:  118 NIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLANKRWIPPPGKGSL 200          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.602e-29
Identity = 60/84 (71.43%), Postives = 72/84 (85.71%), Query Frame = -2
Query:    2 NIELSPSAAVLNCGQGVYEGTKAYRTEDGR-ILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTL 250
            NIE+SPSA VLN GQG++EG KAYR +DG  ILLFRP+ NA RM+ GAERMCMP+P+V+QFV+AV +  LANKRWVPPPGKG+L
Sbjct:  115 NIEISPSAGVLNYGQGLFEGLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPPGKGSL 198          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.088e-28
Identity = 56/83 (67.47%), Postives = 67/83 (80.72%), Query Frame = -2
Query:    2 NIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTL 250
            +I +SP A +LN GQG++EG KAYRTEDGRI LFRPD NA RM+ GA+R+CM  PS +QFV+AVKQ  LAN +WVPPPGKG L
Sbjct:   60 DISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANNKWVPPPGKGAL 142          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.645e-28
Identity = 55/83 (66.27%), Postives = 69/83 (83.13%), Query Frame = -2
Query:    2 NIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTL 250
            +I +SP + +LN GQG++EG KAYRTED RI +FRPD NA RM+ GAER+CM  P+++QFV+AVKQ  LANK+WVPPPGKGTL
Sbjct:   57 DISISPCSPILNYGQGLFEGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPPGKGTL 139          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: ILVE1_BACSU (Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis GN=ilvE PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.451e-15
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = -2
Query:    5 ANIELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGT 253
            A + L PS++V + GQ V+EG KAYRT+DGR+LLFRPD N  R+    ERM MP    +  ++A+ Q+    K WVP   KGT
Sbjct:   52 APLTLDPSSSVFHYGQAVFEGLKAYRTDDGRVLLFRPDQNIKRLNRSCERMSMPPLDEELVLEALTQLVELEKDWVPKE-KGT 133          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: ILVE_MYCLE (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium leprae GN=ilvE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.623e-13
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = -2
Query:   14 IELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPG 247
            I+L PSA VL+  Q V+EG KAYR  DG I+ FRPD NA+R++  A R+ +P    + F+D++ Q+   +  WVP  G
Sbjct:   61 IQLDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRPDANAARLRSSARRIAIPELPDELFIDSLCQLIAVDNAWVPRVG 138          
BLAST of FK826754 vs. ExPASy Swiss-Prot
Match: ILVE_MYCTU (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium tuberculosis GN=ilvE PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.038e-13
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = -2
Query:   14 IELSPSAAVLNCGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPG 247
            IEL PSA VL+  Q V+EG KAYR  DG I+ FR D NA+R++  A R+ +P      F+++++Q+   +K WVP  G
Sbjct:   61 IELDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRADANAARLRSSARRLAIPELPDAVFIESLRQLIAVDKAWVPGAG 138          
The following BLAST results are available for this feature:
BLAST of FK826754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
BCAT2_ARATH5.253e-3380.72Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT1_ARATH1.690e-3174.70Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT4_ARATH8.386e-3171.43Probable branched-chain-amino-acid aminotransferas... [more]
BCAT5_ARATH7.099e-3069.88Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT3_ARATH4.602e-2971.43Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT7_ARATH5.088e-2867.47Putative branched-chain-amino-acid aminotransferas... [more]
BCAT6_ARATH6.645e-2866.27Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
ILVE1_BACSU6.451e-1548.19Branched-chain-amino-acid transaminase 1 OS=Bacill... [more]
ILVE_MYCLE4.623e-1344.87Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_MYCTU6.038e-1344.87Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionclone613 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 613, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826754 ID=FK826754; Name=FK826754; organism=Citrus sinensis; type=EST; length=254bp
ACAGTGTGCCTTTTCCTGGAGGAGGAACCCAACGCTTGTTAGCAAGAGCT
ATTTGTTTCACAGCGTCGACAAACTGATCAACGGAGGGTGACGGCATGCA
CATCCTCTCGGCACCTATCTTCATACGGGAAGCATTTAGATCTGGCCGGA
AGAGAAGAATACGCCCATCTTCTGTCCTGTATGCTTTTGTTCCTTCGTAC
ACTCCCTGTCCACAATTTAAGACTGCTGCTGAAGGGCTTAGCTCAATGTT
TGCG
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