FK826729

Overview
NameFK826729
Unique NameFK826729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6856 contig Csv1_Contig6856:1..288. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS1_CITSI (Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.291e-34
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTVDEVRKAQRAQGPAT MAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.255e-33
Identity = 64/70 (91.43%), Postives = 69/70 (98.57%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MV+V+E+RKAQRA+GPAT MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.255e-33
Identity = 64/70 (91.43%), Postives = 69/70 (98.57%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MV+V+E+RKAQRA+GPAT MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.693e-32
Identity = 63/70 (90.00%), Postives = 69/70 (98.57%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MV+V+E+R+AQRA+GPAT MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRQAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.517e-32
Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MV+V+E+R AQRA+GPAT MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRNAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.835e-32
Identity = 62/70 (88.57%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MV+V+E+RKAQRA+GPAT MAIGTATPPNCVDQSTYPDYYFRITNS+HM +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSDHMNELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.835e-32
Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVR+AQRA+GPAT MAIGTATPPNCVDQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEVRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.023e-31
Identity = 62/70 (88.57%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MV+V E+R+AQRA+GPAT +AIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.023e-31
Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVRKAQRA+GPAT MAIGTATP NCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYM 70
[Close]
BLAST of FK826729 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.745e-31
Identity = 62/70 (88.57%), Postives = 68/70 (97.14%), Query Frame = 1 
Query:   79 MVTVDEVRKAQRAQGPATNMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 288
            MVTV+EVRKAQRA+GPAT +AIGTATPPNC+DQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATVLAIGTATPPNCLDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
The following BLAST results are available for this feature:
BLAST of FK826729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS1_CITSI1.291e-3498.57Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=... [more]
CHS2_SOYBN9.255e-3391.43Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS1_SOYBN9.255e-3391.43Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS5_SOYBN2.693e-3290.00Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS3_SOYBN3.517e-3290.00Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHS6_SOYBN7.835e-3288.57Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS2_CAMSI7.835e-3290.00Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHSY_VIGUN1.023e-3188.57Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHS2_SOLTU1.023e-3191.43Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHS1_CASGL1.745e-3188.57Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionclone507 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 507, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826729 ID=FK826729; Name=FK826729; organism=Citrus sinensis; type=EST; length=288bp
ACGCGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCCG
GGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTTC
GCAAGGCTCAACGTGCCCAAGGTCCGGCCACGAACATGGCCATTGGAACG
GCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATTT
TCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAGC
GCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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