FK826721

Overview
NameFK826721
Unique NameFK826721
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length177
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11924 contig Csv1_Contig11924:417..593. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826721 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.917e-21
Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = -3
Query:    2 YGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWL 175
            YG+FIQIATCLGLM +L IGIPV  I GWWR+CFW+S +PAA+L L M  CAESP WL
Sbjct:  180 YGSFIQIATCLGLMAALFIGIPVHNITGWWRVCFWLSTIPAALLALGMFLCAESPQWL 237          
BLAST of FK826721 vs. ExPASy Swiss-Prot
Match: PLST3_ARATH (Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana GN=At1g79820 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.273e-18
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = -3
Query:    2 YGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWL 175
            YG+  QIATC+GL+GSL  GIP K+  GWWRICFW+S VPAA+L + M  C ESP WL
Sbjct:  183 YGSSTQIATCIGLLGSLFAGIPAKDNLGWWRICFWISTVPAAMLAVFMELCVESPQWL 240          
The following BLAST results are available for this feature:
BLAST of FK826721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PLST2_ARATH7.917e-2170.69Probable plastidic glucose transporter 2 OS=Arabid... [more]
PLST3_ARATH6.273e-1863.79Probable plastidic glucose transporter 3 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionclone475 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 475, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826721 ID=FK826721; Name=FK826721; organism=Citrus sinensis; type=EST; length=177bp
ACAGCCAATGCGGACTCTCAGCACAAAAGACCATAGCAAGACAAAGTATA
GCAGCAGGAACTATAGATACCCAAAAACAAATGCGCCACCAGCCAGCAAT
TTCTTTGACAGGGATTCCTATCAAAAGAGATCCCATAAGTCCAAGACAAG
TTGCAATCTGGATGAAAGCTCCATAGG
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