FK826704

Overview
NameFK826704
Unique NameFK826704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8890 contig Csv1_Contig8890:129..523. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FK826704 vs. ExPASy Swiss-Prot
Match: Y38K_CORSE (Uncharacterized 38.1 kDa protein OS=Corydalis sempervirens PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.919e-21
Identity = 40/56 (71.43%), Postives = 51/56 (91.07%), Query Frame = 2 
Query:    2 QEVMLKKGCAWHYSAYDQRSELAKWEKEARAKRVGLWAASNPEEPWEWRKDRREGR 169
            QE MLKKG AWHY+AYD+R +L+KWE++ARA RVGLWA+SNPE+PWEWRK++R G+
Sbjct:  283 QEKMLKKGLAWHYTAYDKRPQLSKWEEKARAARVGLWASSNPEKPWEWRKNKRNGK 338
The following BLAST results are available for this feature:
BLAST of FK826704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y38K_CORSE7.919e-2171.43Uncharacterized 38.1 kDa protein OS=Corydalis semp... [more]
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Properties
Property NameValue
Genbank descriptionclone024 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 024, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826704 ID=FK826704; Name=FK826704; organism=Citrus sinensis; type=EST; length=395bp
ACAGGAAGTGATGCTCAAGAAAGGCTGTGCATGGCATTACTCTGCCTATG
ACCAACGCTCAGAACTTGCAAAATGGGAAAAAGAGGCTCGAGCAAAGAGA
GTTGGGTTATGGGCAGCATCAAACCCAGAAGAGCCATGGGAATGGAGAAA
GGACAGGCGCGAAGGCCGATAGCATTGCCCTTCCAAGGAGACAAATGTAA
ATTCCTTGTCTGCCTCATATTGTCTGGACAACCGTAAGCCAGTCAGTTTT
CACGTTTAGGACCTGGAGTTACTGCAGAAGAGAAACACAGCAACACTGAA
AATAAAGATCAGTCCACAGTTTGTGTCCTATCTAATTCGGAGCTACCATT
GCTGGGTATCTAATTTATCATTGCAACAGTGACCGGTCTTCGTTG
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