FK826687

Overview
NameFK826687
Unique NameFK826687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length376
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12302 contig Csv1_Contig12302:1192..1567. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.620e-39
Identity = 66/125 (52.80%), Postives = 98/125 (78.40%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYVHAPTAVPTLHPELG 376
            LRLYPP+  L++ V K+TKLG+ T+PAG Q+ LP +++H++  +WG+DA+EF P RF +G++ A KN V+Y PF+ GPR+C+GQNFAL++AK+  AMILQ + F+++PSYVHAP  + T+ P+ G
Sbjct:  390 LRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFG 514          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.883e-18
Identity = 43/105 (40.95%), Postives = 67/105 (63.81%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LRLYP    L RA  K+ ++  + +P G  + +P+ ++H+DP+LW +   EF+PERF++   K   N  +Y PF +GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  364 LRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWPEPE-EFRPERFSKK-HKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.883e-18
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 2
Query:    2 LRLYPPLTAL-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFELSPSYV 334
            LRLYP  + + +R  LK T +  + + AG  I +    +H DP++WGDD  EFKPER+  G  +    +  Y PF  GPRIC+G   A++E KM    IL+NY+FE +P  V
Sbjct:  384 LRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESG-DELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFETTPETV 494          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17
Identity = 41/105 (39.05%), Postives = 67/105 (63.81%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LR++P    L R   K+ ++  +T+P G  + +P+ ++H +PELW +   EF+PERF++  +K + N   Y PF +GPR C+G  FA++  K+A   ILQN+SF+
Sbjct:  364 LRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWPEPE-EFRPERFSKN-NKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFK 466          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17
Identity = 39/105 (37.14%), Postives = 68/105 (64.76%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LR++P    L R   K+ ++  +++P G  + +P+ ++H+DP+LW +   EF+PERF++  +K + N   Y PF +GPR C+G  FA++  K+A   +LQN+SF+
Sbjct:  364 LRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLWPEPE-EFRPERFSKK-NKDSINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFK 466          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: C13A6_CAEEL (Putative cytochrome P450 CYP13A6 OS=Caenorhabditis elegans GN=cyp-13A6 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.440e-17
Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 2
Query:    2 LRLYP-PLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSF 313
            LRLYP   TA +R  ++ET +  +    G+ I +    +H +P +WG+D  +FKPER+  G  +  ++  SY PF SGPR C+G   A +E K+  A IL+ YSF
Sbjct:  382 LRLYPLGTTANTRKCMRETTINGVNFDEGMNIQVDTWTLHHNPRIWGEDVEDFKPERWENGACEHLEHNGSYIPFGSGPRQCIGMRLAQMEQKILLAQILKEYSF 486          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.163e-17
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 2
Query:    2 LRLYP-PLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LRLYP    A SR  ++ TKLGN+ +  G  I +    +H DP +WGDDA +FKPER+    S     +  Y PF  GPR C+G   A +E K+    IL+ ++FE
Sbjct:  384 LRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFE 489          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 7.101e-17
Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 2
Query:    2 LRLYPPLT-ALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFEL 319
            LRLYP  T A SR  ++ TKLGN+ +  G  + +    +H D ++WGDDA EFKPER+ +        +  Y  F  GPR CVG   A +E KM  A IL+ Y+FE+
Sbjct:  384 LRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTFEV 490          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.211e-16
Identity = 41/104 (39.42%), Postives = 64/104 (61.54%), Query Frame = 2
Query:    2 LRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSF 313
            LR++P    L R   K+ ++  +++P G  + +P+ ++H +PE W +   EF+PERF++  +K   N   Y PF +GPR CVG  FAL+  K+A   ILQN+SF
Sbjct:   75 LRMFPIAGRLERLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFWPEPE-EFRPERFSKK-NKDGINPYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSF 176          
BLAST of FK826687 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.582e-16
Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    2 LRLYPPLT-ALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMATAMILQNYSFE 316
            LRLYP  + + SR  +K T +  + + AGV + +    +H DPELWG+D  EFKPER++    +  +++ +Y PF  GPR C+G   A++E K+    +L+NY+FE
Sbjct:  381 LRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWS--TDEPLEHKGAYLPFGLGPRQCIGMRLAIMEQKILLTHLLKNYTFE 484          
The following BLAST results are available for this feature:
BLAST of FK826687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C72A1_CATRO8.620e-3952.80Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
CP3AT_PIG2.883e-1840.95Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
C13A7_CAEEL2.883e-1841.96Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
CP3AS_BOVIN1.869e-1739.05Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP3AO_SHEEP1.869e-1737.14Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
C13A6_CAEEL2.440e-1740.00Putative cytochrome P450 CYP13A6 OS=Caenorhabditis... [more]
C13A1_CAEEL4.163e-1741.51Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
C13AA_CAEEL7.101e-1742.99Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
CP3AJ_CAPAE1.211e-1639.42Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
C13A2_CAEEL1.582e-1639.62Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionclone287 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 287, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826687 ID=FK826687; Name=FK826687; organism=Citrus sinensis; type=EST; length=376bp
ACTCAGGCTTTATCCGCCCTTAACTGCGCTTAGTCGAGCTGTTCTTAAGG
AAACGAAACTCGGAAACTTGACACTACCCGCTGGGGTTCAAATTGGCTTG
CCGATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACGATGCAGT
TGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCGGCAAAAA
ATCAAGTTTCATATTTCCCATTCGCATCGGGTCCTAGGATATGTGTTGGA
CAAAATTTTGCTCTAGTAGAAGCAAAAATGGCCACGGCAATGATTCTTCA
AAACTACTCATTCGAGTTGTCTCCATCCTATGTCCATGCTCCAACGGCGG
TTCCAACCCTTCATCCGGAACTGGGT
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