FK826673

Overview
NameFK826673
Unique NameFK826673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length277
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3822 contig Csv1_Contig3822:860..1136. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826673 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.567e-21
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = -2
Query:   73 KSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALL 276
            KSILHRG+VNKEKVRISWAVFCE           PETVSE +PAMFPPRTF +HI+HKLFR++Q+ALL
Sbjct:  288 KSILHRGMVNKEKVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHIQHKLFRKSQEALL 355          
BLAST of FK826673 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.438e-19
Identity = 46/71 (64.79%), Postives = 52/71 (73.24%), Query Frame = -2
Query:   64 KSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDE 276
            KSILHRGLVNKEKVRISWAVFCE           PE VS + PA FPPRTF QHIEHKLF + Q+ L+S++
Sbjct:  284 KSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEK 354          
BLAST of FK826673 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18
Identity = 45/67 (67.16%), Postives = 49/67 (73.13%), Query Frame = -2
Query:   76 KSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDAL 276
            KSILHRGLVNKEKVRISWAVFCE           PETVSE +P  FPPRTF QH++HKLFR+T   L
Sbjct:  290 KSILHRGLVNKEKVRISWAVFCEPPKEKIVLQPLPETVSEVEPPRFPPRTFAQHLKHKLFRKTDGDL 356          
BLAST of FK826673 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.512e-16
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = -2
Query:   91 KSILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRR 276
            KSILHRG+VNKEKVR SWA+FCE           PETV+E +P  FPPRTF QH+ HKLFR+
Sbjct:  288 KSILHRGVVNKEKVRFSWAIFCEPPKEKIILKPLPETVTEAEPPRFPPRTFAQHMAHKLFRK 349          
BLAST of FK826673 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.229e-13
Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = -2
Query:   61 SILHRGLVNKEKVRISWAVFCEXXXXXXXXXXXPETVSEQKPAMFPPRTFQQHIEHKLFRRTQDALLSDEE 273
            S+LHRGLVN+E VRISW VFCE           PE V+E  PA F PRTF+QH++ KLF++ Q      EE
Sbjct:  307 SVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKKKQQHKAKAEE 377          
The following BLAST results are available for this feature:
BLAST of FK826673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
LDOX_MALDO3.567e-2170.59Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_ARATH7.438e-1964.79Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_PERFR2.826e-1867.16Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_PETHY4.512e-1662.90Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_MAIZE1.229e-1352.11Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
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Properties
Property NameValue
Genbank descriptionclone240 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 240, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826673 ID=FK826673; Name=FK826673; organism=Citrus sinensis; type=EST; length=277bp
ACTGTAGTGAAAGCATTCACCGGAAGATTAAACATAATAAGAAATCCGAT
TAATTAACTATTCTTCATCGGAGAGGAGAGCATCCTGCGTCCTCCTAAAC
AGCTTGTGCTCAATGTGCTGTTGAAAGGTGCGAGGAGGGAACATTGCCGG
CTTTTGCTCAGAGACAGTTTCCGGGAGAGGCTTGAGGATAATCTTGTCCT
TCGGTGGCTCACAGAAAACAGCCCATGAGATCCTAACCTTTTCCTTGTTA
ACAAGTCCCCTGTGAAGAATACTCTTG
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