FK826662

Overview
NameFK826662
Unique NameFK826662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length109
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11033 contig Csv1_Contig11033:484..592. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826662 vs. ExPASy Swiss-Prot
Match: CY11_SOLTU (Cytochrome c1-1, heme protein, mitochondrial OS=Solanum tuberosum GN=CYCL PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.260e-13
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = -3
Query:    3 PATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIF 107
            PATEAQMGKDVV+FLSWAAEPEMEERKLMGFKWIF
Sbjct:  255 PATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIF 289          
BLAST of FK826662 vs. ExPASy Swiss-Prot
Match: CY12_SOLTU (Cytochrome c1-2, heme protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=CYCL PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.806e-13
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = -3
Query:    3 PATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIF 107
            PATEAQMGKDVV+FL+WAAEPEMEERKLMGFKWIF
Sbjct:  195 PATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIF 229          
The following BLAST results are available for this feature:
BLAST of FK826662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CY11_SOLTU1.260e-1397.14Cytochrome c1-1, heme protein, mitochondrial OS=So... [more]
CY12_SOLTU2.806e-1394.29Cytochrome c1-2, heme protein, mitochondrial (Frag... [more]
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Properties
Property NameValue
Genbank descriptionclone185 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 185, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826662 ID=FK826662; Name=FK826662; organism=Citrus sinensis; type=EST; length=109bp
ACGAATATCCATTTAAAACCCATCAGCTTCCTCTCTTCCATTTCCGGTTC
TGCAGCCCACGATAAAAATGTCACAACATCTTTTCCCATCTGAGCTTCTG
TTGCAGGGG
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