FK826651

Overview
NameFK826651
Unique NameFK826651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length481
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3245 contig Csv1_Contig3245:324..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FK826651 vs. ExPASy Swiss-Prot
Match: DHB4_MOUSE (Peroxisomal multifunctional enzyme type 2 OS=Mus musculus GN=Hsd17b4 PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 6.806e-29
Identity = 65/154 (42.21%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   18 GAIDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGL 479
            G  ++PGL  +    LHG+QY+ELYKP P S  ++ EA IA + DKG   ++ ++  SY+ +  EL+C N+ + F+ G+GGF                 + V +P   P AV  D T  +QA +YRLSGD+NPLH DP  A  AGF +PILHGL
Sbjct:  389 GLAEVPGLSFNFAKALHGEQYLELYKPLPRSGELKCEAVIADILDKGSGVVIVMDVYSYSGK--ELICYNQFSVFVVGSGGFGGKRTSEKLK-------AAVAVPNRPPDAVLRDATSLNQAALYRLSGDWNPLHIDPDFASVAGFEKPILHGL 533          
BLAST of FK826651 vs. ExPASy Swiss-Prot
Match: DHB4_RAT (Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus GN=Hsd17b4 PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 1.980e-28
Identity = 65/154 (42.21%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   18 GAIDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGL 479
            G  ++PGL  +   +LHG+QY+ELYKP P S  ++ EA IA + DKG   ++ ++  SY+ +  EL+C N+ + F+ G+GGF                 + V +P   P AV  D T  +QA +YRLSGD NPLH DP  A  AGF +PILHGL
Sbjct:  389 GLAEVPGLSINFAKVLHGEQYLELYKPLPRSGELKCEAVIADILDKGSGIVIVMDVYSYSGK--ELICYNQFSVFVVGSGGFGGKRTSEKLK-------AAVAVPSRPPDAVLRDTTSLNQAALYRLSGDSNPLHIDPSFASIAGFEKPILHGL 533          
BLAST of FK826651 vs. ExPASy Swiss-Prot
Match: DHB4_HUMAN (Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens GN=HSD17B4 PE=1 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 2.586e-28
Identity = 68/155 (43.87%), Postives = 94/155 (60.65%), Query Frame = 3
Query:   18 GAIDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSV-VKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGL 479
            G  ++PGL  +   +LHG+QY+ELYKP P +  ++ EA +A + DKG   ++ ++  SY+ +  EL+C N+ + FL G+GGF          K  +  V V V IP   P AV  D T  +QA +YRLSGD+NPLH DP  A  AGF +PILHGL
Sbjct:  390 GLAEIPGLSINFAKVLHGEQYLELYKPLPRAGKLKCEAVVADVLDKGSGVVIIMDVYSYSEK--ELICHNQFSLFLVGSGGFGG--------KRTSDKVKVAVAIPNRPPDAVLTDTTSLNQAALYRLSGDWNPLHIDPNFASLAGFDKPILHGL 534          
BLAST of FK826651 vs. ExPASy Swiss-Prot
Match: FOX2_NEUCR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa GN=fox-2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.525e-28
Identity = 67/144 (46.53%), Postives = 86/144 (59.72%), Query Frame = 3
Query:   51 PRLLLHGQQYMELYK-PFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGL 479
            P +LLHG+QY+E+ K P P+S  + ++  +  + DKG AAI++    ++NAE+GE L  N MT FLRG GGF    +P      +    +  K P   P AV E  T   QA +YRLSGDYNPLH DP  AK  GF  PILHGL
Sbjct:  688 PMMLLHGEQYLEVRKYPIPTSGRLVSKGKLLEVVDKGSAAIVKQGITTFNAETGEELFYNEMTVFLRGCGGFGGQKKPAD----RGASTAANKPPARSPDAVVEVQTTEEQAAIYRLSGDYNPLHVDPAFAKVGGFKVPILHGL 827          
BLAST of FK826651 vs. ExPASy Swiss-Prot
Match: MFEB_DICDI (Probable 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase OS=Dictyostelium discoideum GN=mfeB PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.052e-21
Identity = 57/152 (37.50%), Postives = 84/152 (55.26%), Query Frame = 3
Query:   30 LPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQ-PFAVFEDYTQPSQALVYRLS-GDYNPLHSDPMVAKAAGFSRPILHGL 479
            + G++ DP +LLHG+Q +E+    P       E+ I  L+DKGK A+L ++  +    SG+ +  N  + F+RG GGF     P             ++IPK + P A+ +  T   QA++YRL+ GD NPLH DP ++K  GF  PILHGL
Sbjct:   72 IDGIEFDPMMLLHGEQELEILNEIPVEGVFVTESKITNLYDKGKGALLILQCITSEKSSGKPIFKNIFSFFIRGIGGFGGDRGPNE---------KPIQIPKDRAPDAISKQATSEDQAVIYRLAGGDLNPLHIDPEMSKIGGFEVPILHGL 214          
BLAST of FK826651 vs. ExPASy Swiss-Prot
Match: FOX2_YEAST (Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces cerevisiae GN=FOX2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.279e-15
Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 3
Query:   57 LLLHGQQYMELYKP-FPSSASIRNEACIAGLHDK-GKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQ-PFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGL 479
            +LLHG+QY +L  P  PS+ +++  A    + DK GKAA++    ++Y+ ++ +L+  N  + F+RGA       +     K     V   ++P  + P    E  T   QA +YRLSGD+NPLH DP +AKA  F  PILHGL
Sbjct:  686 MLLHGEQYFKLCTPTMPSNGTLKTLAKPLQVLDKNGKAALVVGGFETYDIKTKKLIAYNEGSFFIRGA--HVPPEKEVRDGKRAKFAVQNFEVPHGKVPDFEAEISTNKDQAALYRLSGDFNPLHIDPTLAKAVKFPTPILHGL 827          
BLAST of FK826651 vs. ExPASy Swiss-Prot
Match: FOX2_CANTR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 8.077e-14
Identity = 48/145 (33.10%), Postives = 70/145 (48.28%), Query Frame = 3
Query:   48 DPRLLLHGQQYMELYK-PFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGL 479
            +P LLLHG+ Y++++  P P+   I+          KG   ++   +KS + +SGEL+  N  T F+R     +       Y+       +    PK  P    +       A +YRLSGD NPLH DP  AK A F +PILHG+
Sbjct:  693 NPMLLLHGEHYLKVHSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVDNKSGELIYSNEATYFIRNCQADNKV-----YADRPAFATNQFLAPKRAPDYQVDVPVSEDLAALYRLSGDRNPLHIDPNFAKGAKFPKPILHGM 832          
The following BLAST results are available for this feature:
BLAST of FK826651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DHB4_MOUSE6.806e-2942.21Peroxisomal multifunctional enzyme type 2 OS=Mus m... [more]
DHB4_RAT1.980e-2842.21Peroxisomal multifunctional enzyme type 2 OS=Rattu... [more]
DHB4_HUMAN2.586e-2843.87Peroxisomal multifunctional enzyme type 2 OS=Homo ... [more]
FOX2_NEUCR7.525e-2846.53Peroxisomal hydratase-dehydrogenase-epimerase OS=N... [more]
MFEB_DICDI1.052e-2137.50Probable 3-alpha,7-alpha,12-alpha-trihydroxy-5-bet... [more]
FOX2_YEAST3.279e-1537.50Peroxisomal hydratase-dehydrogenase-epimerase OS=S... [more]
FOX2_CANTR8.077e-1433.10Peroxisomal hydratase-dehydrogenase-epimerase OS=C... [more]
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Properties
Property NameValue
Genbank descriptionclone149 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 149, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826651 ID=FK826651; Name=FK826651; organism=Citrus sinensis; type=EST; length=481bp
ACGCGGGGGAGCCAAGTGGTGCCATAGATCTTCCAGGACTGCAACATGAT
CCACGACTTTTGCTGCATGGACAACAATACATGGAACTGTATAAGCCATT
TCCTTCTAGCGCTTCTATACGAAATGAAGCATGTATTGCCGGATTGCATG
ATAAGGGTAAAGCTGCTATCCTTGAGATTGAAACCAAAAGTTACAATGCA
GAATCTGGTGAACTGTTATGCATGAATCGGATGACTGCCTTTCTGCGGGG
TGCTGGCGGCTTTTCAAATTCATCTCAACCATTTTCCTACTCAAAATATC
AAACTATCCCTGTTTCAGTTGTGAAAATCCCTAAAAGTCAACCTTTTGCA
GTATTTGAGGATTATACCCAACCATCTCAGGCATTGGTGTATAGGCTATC
TGGTGATTATAATCCTCTTCATTCAGATCCTATGGTTGCAAAAGCTGCTG
GTTTCTCTCGGCCAATATTGCATGGGCTGTG
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