FK826648

Overview
NameFK826648
Unique NameFK826648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length168
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11350 contig Csv1_Contig11350:223..390. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FK826648 vs. ExPASy Swiss-Prot
Match: ACLY_DICDI (Probable ATP-citrate synthase OS=Dictyostelium discoideum GN=acly PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.108e-13
Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 2 
Query:    2 AAEVRAPTHIISTISDDRGEEPCYAGAPMSSIVEQGYGVGDVISLLWFKRSLPRY 166
            A +VR PT IISTI DDRG+E  YAG P+S + ++ Y +GDVI LLWFKR LP Y
Sbjct:  358 AGKVRKPTSIISTICDDRGDELSYAGVPISEVCKEQYNMGDVIGLLWFKRKLPPY 412
[Close]
BLAST of FK826648 vs. ExPASy Swiss-Prot
Match: ACL1_NEUCR (Probable ATP-citrate synthase subunit 1 OS=Neurospora crassa GN=B14D6.310 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.497e-11
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 2 
Query:   11 VRAPTHIISTISDDRGEEPCYAGAPMSSIVEQGYGVGDVISLLWFKRSLPRY 166
            +R P   ISTISDDRG+E  YAG P+S + ++  G+G V+SLLWF+R LP Y
Sbjct:  390 IRKPAAFISTISDDRGQELLYAGMPISDVFKEEIGIGGVMSLLWFRRRLPDY 441
[Close]
BLAST of FK826648 vs. ExPASy Swiss-Prot
Match: ACL1_SORMA (ATP-citrate synthase subunit 1 OS=Sordaria macrospora GN=ACL1 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.791e-11
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 2 
Query:   11 VRAPTHIISTISDDRGEEPCYAGAPMSSIVEQGYGVGDVISLLWFKRSLPRY 166
            +R P   ISTISDDRG+E  YAG P+S +  +  G+G V+SLLWF+R LP Y
Sbjct:  394 IRKPAAFISTISDDRGQELLYAGMPISDVFREEIGIGGVMSLLWFRRRLPDY 445
The following BLAST results are available for this feature:
BLAST of FK826648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ACLY_DICDI2.108e-1361.82Probable ATP-citrate synthase OS=Dictyostelium dis... [more]
ACL1_NEUCR7.497e-1155.77Probable ATP-citrate synthase subunit 1 OS=Neurosp... [more]
ACL1_SORMA9.791e-1155.77ATP-citrate synthase subunit 1 OS=Sordaria macrosp... [more]
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Properties
Property NameValue
Genbank descriptionclone069 Citrus sinensis low-temperature inducible suppression subtractive hybridization (SSH) library Citrus sinensis cDNA clone 069, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FK826648 ID=FK826648; Name=FK826648; organism=Citrus sinensis; type=EST; length=168bp
CGCGGCCGAGGTACGGGCTCCAACTCATATTATTTCAACCATCTCTGATG
ACAGAGGTGAGGAGCCATGCTATGCTGGTGCACCAATGTCTTCAATTGTA
GAACAAGGTTATGGTGTGGGTGATGTTATTTCCCTTTTGTGGTTTAAACG
CAGCCTTCCCCGCTACTG
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