FK826646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FK826646 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.291e-20 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = -3 Query: 2 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ 145 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ Sbjct: 749 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ 796
BLAST of FK826646 vs. ExPASy Swiss-Prot
Match: CLPAA_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.540e-19 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = -3 Query: 2 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ 145 NTLLIMTSNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQ Sbjct: 752 NTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQ 799
BLAST of FK826646 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.480e-19 Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = -3 Query: 2 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ 145 NTLLIMTSNVGSSVIEKGGRRIGFDLD DEKDSSYNRIKSLVTEELKQ Sbjct: 749 NTLLIMTSNVGSSVIEKGGRRIGFDLDLDEKDSSYNRIKSLVTEELKQ 796
BLAST of FK826646 vs. ExPASy Swiss-Prot
Match: CLPA_BRANA (ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.441e-17 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = -3 Query: 2 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ 145 NTLLIMTSNVGSSVIEKGGRRIGFDLDY EKDSSYNRIKSLVT+ELKQ Sbjct: 697 NTLLIMTSNVGSSVIEKGGRRIGFDLDY-EKDSSYNRIKSLVTQELKQ 743
BLAST of FK826646 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.304e-12 Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = -3 Query: 2 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ 145 NTLLI+TSNVGS VIEKGG +GFDL D+ +S Y RIK+LV EELKQ Sbjct: 652 NTLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQ 699
BLAST of FK826646 vs. ExPASy Swiss-Prot
Match: CLPC_PORYE (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.047e-12 Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = -3 Query: 2 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ 145 NTLLIMTSN+GS VIEKGG +GF+L D+ +S Y R++SLV EELKQ Sbjct: 655 NTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQ 702
BLAST of FK826646 vs. ExPASy Swiss-Prot
Match: CLPC_PORPU (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.047e-12 Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = -3 Query: 2 NTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQ 145 NTLLIMTSN+GS VIEKGG +GF+L D+ +S Y R++SLV EELKQ Sbjct: 655 NTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQ 702 The following BLAST results are available for this feature:
BLAST of FK826646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FK826646 ID=FK826646; Name=FK826646; organism=Citrus sinensis; type=EST; length=147bpback to top |