FE659326

Overview
NameFE659326
Unique NameFE659326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1150 contig Csv1_Contig1150:508..733. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.886e-26
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = -3
Query:   57 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSG 224
            QKVVKGNPNPRSYYKCT  GCPVRKHVERASHD+RAVITTYEGKHNHDVPAARGSG
Sbjct:  372 QKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDMRAVITTYEGKHNHDVPAARGSG 427          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.212e-24
Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = -3
Query:   60 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGS 224
            QKVVKGNPNPRSYYKCT PGC VRKHVERASHDL++VITTYEGKHNHDVPAAR S
Sbjct:  497 QKVVKGNPNPRSYYKCTAPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNS 551          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.302e-22
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = -3
Query:   45 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRAL 224
            QKVV+GNPNPRSYYKCT  GCPVRKHVERASHD +AVITTYEGKH+HDVP ++ S +  +
Sbjct:  391 QKVVRGNPNPRSYYKCTAHGCPVRKHVERASHDPKAVITTYEGKHDHDVPTSKSSSNHEI 450          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.607e-22
Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = -3
Query:   48 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRA 224
            QKVVKGNP+PRSYYKCT P C VRKHVERAS D +AVITTYEGKHNHDVPAAR   + A
Sbjct:  316 QKVVKGNPHPRSYYKCTTPNCTVRKHVERASTDAKAVITTYEGKHNHDVPAARNGTAAA 374          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 4.768e-21
Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = -3
Query:   48 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRA 224
            QKVVKGNP PRSYYKCT PGC VRKHVERA+ D +AV+TTYEGKHNHD+PAA+ S   A
Sbjct:  419 QKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPAAKSSSHAA 477          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.768e-21
Identity = 46/62 (74.19%), Postives = 51/62 (82.26%), Query Frame = -3
Query:   39 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRALPD 224
            QKVVKGNP PRSYYKCT P C VRKHVERA+ D +AV+TTYEGKHNHDVPAAR S  +  P+
Sbjct:  425 QKVVKGNPYPRSYYKCTTPDCGVRKHVERAATDPKAVVTTYEGKHNHDVPAARTSSHQLRPN 486          

HSP 2 Score: 69.707 bits (169), Expect = 5.284e-12
Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = -3
Query:   54 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGS 224
            QK VKG+  PRSYYKCTHP CPV+K VER S D +     Y+G+HNH++P  RG+ +
Sbjct:  260 QKQVKGSDFPRSYYKCTHPACPVKKKVER-SLDGQVTEIIYKGQHNHELPQKRGNNN 315          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.696e-18
Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = -3
Query:   60 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGS 224
            QKVVKGNPNPRSYYKCT  GC V KHVERAS D ++V+TTY GKH H VPAAR S
Sbjct:  382 QKVVKGNPNPRSYYKCTANGCTVTKHVERASDDFKSVLTTYIGKHTHVVPAARNS 436          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRKY1_ARATH (WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.215e-18
Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = -3
Query:   66 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAAR 224
            QK VKG+P PRSYY+C+ PGCPV+KHVER+SHD + +ITTYEGKH+HD+P  R
Sbjct:  317 QKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMPPGR 369          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.934e-18
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = -3
Query:   66 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAAR 224
            QKVVKGNPNPRSYYKCT  GC VRKHVERA  D ++VITTYEGKH H +P  R
Sbjct:  244 QKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTYEGKHKHQIPTPR 296          
BLAST of FE659326 vs. ExPASy Swiss-Prot
Match: WRK25_ARATH (Probable WRKY transcription factor 25 OS=Arabidopsis thaliana GN=WRKY25 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.449e-17
Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = -3
Query:   69 QKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAA 224
            QKVVKGN NPRSYYKCT  GC V+K VER++ D RAV+TTYEG+HNHD+P A
Sbjct:  338 QKVVKGNTNPRSYYKCTFQGCGVKKQVERSAADERAVLTTYEGRHNHDIPTA 389          
The following BLAST results are available for this feature:
BLAST of FE659326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
WRK33_ARATH2.886e-2694.64Probable WRKY transcription factor 33 OS=Arabidops... [more]
WRKY2_ARATH1.212e-2490.91Probable WRKY transcription factor 2 OS=Arabidopsi... [more]
WRK20_ARATH3.302e-2275.00Probable WRKY transcription factor 20 OS=Arabidops... [more]
WRK58_ARATH9.607e-2279.66Probable WRKY transcription factor 58 OS=Arabidops... [more]
WRKY4_ARATH4.768e-2176.27Probable WRKY transcription factor 4 OS=Arabidopsi... [more]
WRKY3_ARATH4.768e-2174.19Probable WRKY transcription factor 3 OS=Arabidopsi... [more]
WRK34_ARATH1.696e-1876.36Probable WRKY transcription factor 34 OS=Arabidops... [more]
WRKY1_ARATH2.215e-1869.81WRKY transcription factor 1 OS=Arabidopsis thalian... [more]
WRK26_ARATH4.934e-1875.47Probable WRKY transcription factor 26 OS=Arabidops... [more]
WRK25_ARATH2.449e-1773.08Probable WRKY transcription factor 25 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionA113 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659326 ID=FE659326; Name=FE659326; organism=Citrus sinensis; type=EST; length=226bp
CTATTGCTGTTACTGTTATGGTTATTATTGCTGCTATTATCCGGCAGAGC
CCTGCTGCCGCTGCCGCGAGCTGCCGGAACATCATGGTTGTGCTTTCCCT
CATAGGTTGTGATCACTGCTCTAAGATCGTGTGATGCTCTCTCAACATGC
TTTCTCACTGGACAACCTGGATGCGTACACTTGTAATAACTCCTTGGATT
TGGATTCCCCTTTACAACTTTTTGGC
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