FE659322

Overview
NameFE659322
Unique NameFE659322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length382
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12524 contig Csv1_Contig12524:223..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 3.040e-52
Identity = 100/126 (79.37%), Postives = 111/126 (88.10%), Query Frame = 3
Query:    3 CVTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF 380
            CVTCD +TNRINSLTIFAG + GQIP+ VGDLPYLETL FHK P+LTGPIQPAIAKLK LK+LR+SWTN+SG VPDF+SQL NLTFL+LSFNNL+G IPSSLS+L  LGAL LDRNKLTG IP SF
Sbjct:   62 CVTCDSTTNRINSLTIFAGQVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSLRLSWTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDRNKLTGHIPISF 187          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.012e-47
Identity = 92/126 (73.02%), Postives = 106/126 (84.13%), Query Frame = 3
Query:    3 CVTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF 380
            CV CDL+T+RINSLTIF+G L GQIP  VGDLP+LETL+F KL +LTG I PAIAKLK+LK +R+SWTN+SGPVP F S+L NLT+L+LSFNNLSG IP SLS L  LGALHLDRN LTG IP+SF
Sbjct:   65 CVECDLTTHRINSLTIFSGQLSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIPDSF 190          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.616e-45
Identity = 90/128 (70.31%), Postives = 108/128 (84.38%), Query Frame = 3
Query:    3 CVTCDLST--NRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF 380
            C+ C  +T  +R+ +LTIF+G + GQIP+EVGDLPYLETL+F KL +LTG IQP IAKLKNL+ LR+SWTN++GP+PDFISQL NL FLELSFN+LSG+IPSSLS L K+ AL L RNKLTGSIPESF
Sbjct:   60 CLECGDATVNHRVTALTIFSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWTNLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESF 187          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 4.553e-40
Identity = 82/128 (64.06%), Postives = 102/128 (79.69%), Query Frame = 3
Query:    3 CVTCDLST--NRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF 380
            C+ C  +T  +R+ SL I  G++ GQIP EVGDLPYL +L+F KL +LTG IQP IAKLKNL  LR+SWTN++GPVP+F+SQL NL +++LSFN+LSG+IPSSLS L+KL  L L RNKLTG IPESF
Sbjct:   60 CLECGDATVNHRVTSLIIQDGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESF 187          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: PGIP1_PHAVU (Polygalacturonase inhibitor 1 OS=Phaseolus vulgaris GN=PGIP1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.217e-25
Identity = 59/129 (45.74%), Postives = 83/129 (64.34%), Query Frame = 3
Query:    6 VTCDLSTN--RINSLTIFAGDLPGQ--IPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF 380
            V CD  T   R+N+L +   +LP    IPS + +LPYL  L    + +L GPI PAIAKL  L  L I+ TN+SG +PDF+SQ+  L  L+ S+N LSGT+P S+S L  LG +  D N+++G+IP+S+
Sbjct:   70 VLCDTDTQTYRVNNLDLSGHNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLGGITFDGNRISGAIPDSY 198          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: PGIP3_PHAVU (Polygalacturonase inhibitor 3 OS=Phaseolus vulgaris GN=PGIP3 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.019e-23
Identity = 58/129 (44.96%), Postives = 82/129 (63.57%), Query Frame = 3
Query:    6 VTCDLSTN--RINSLTIFAGDLPGQ--IPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF 380
            V CD  T   R+N+L +   +LP    IPS + +LPYL  L    + +L GPI PAIAKL  L  L I+ TN+SG +PDF+SQ+  L  L+ S+N LSGT+P S+S L  L  +  D N+++G+IP+S+
Sbjct:   70 VLCDTDTQTYRVNNLDLSGHNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSY 198          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: PGIP2_PHAVU (Polygalacturonase inhibitor 2 OS=Phaseolus vulgaris GN=PGIP2 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.738e-23
Identity = 58/129 (44.96%), Postives = 82/129 (63.57%), Query Frame = 3
Query:    6 VTCDLSTN--RINSLTIFAGDLPGQ--IPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF 380
            V CD  T   R+N+L +   +LP    IPS + +LPYL  L    + +L GPI PAIAKL  L  L I+ TN+SG +PDF+SQ+  L  L+ S+N LSGT+P S+S L  L  +  D N+++G+IP+S+
Sbjct:   70 VLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSY 198          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.377e-20
Identity = 56/123 (45.53%), Postives = 78/123 (63.41%), Query Frame = 3
Query:    6 VTCDLSTNRINSLTIF-AGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIP 371
            V CD    R+N++ I  A D+ GQIPS V  L  L +L   +LP L+GPI   +  L NL+ L IS TN+SG +PD ++++ +L  ++LS N+L+G IP+S S L  L +L L  NKLTG IP
Sbjct:   64 VRCD-EAGRVNNVFIDGANDVRGQIPSAVAGLTALMSLSLFRLPGLSGPIPACLTALSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIP 185          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.398e-18
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 3
Query:    6 VTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPE 374
            V CDLS N + +L + A  L GQ+ SE+G+L  L TL    L S +G +   +    +L+ L +S  + SG VPD    L NLTFL L  NNLSG IP+S+  L +L  L +  N L+G+IPE
Sbjct:   69 VICDLSGNVVETLNLSASGLSGQLGSEIGELKSLVTLDL-SLNSFSGLLPSTLGNCTSLEYLDLSNNDFSGEVPDIFGSLQNLTFLYLDRNNLSGLIPASVGGLIELVDLRMSYNNLSGTIPE 190          

HSP 2 Score: 72.4034 bits (176), Expect = 8.093e-13
Identity = 41/114 (35.96%), Postives = 67/114 (58.77%), Query Frame = 3
Query:   30 RINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIP 371
            ++ SL +   D  G +P E+G+   L +L+  K  +LTG I  ++  L+ +  + +S   +SG +P  +   ++L  L+L+ N L G IP +LSKL+KL +L L  NKL+G IP
Sbjct:  245 KLVSLDLSFNDFQGGVPPEIGNCSSLHSLVMVKC-NLTGTIPSSMGMLRKVSVIDLSDNRLSGNIPQELGNCSSLETLKLNDNQLQGEIPPALSKLKKLQSLELFFNKLSGEIP 357          

HSP 3 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 3
Query:   15 DLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPES 377
            DLS NR++          G IP E+G+   LETL  +    L G I PA++KLK L++L + +  +SG +P  I ++ +LT + +  N L+G +P  +++L+ L  L L  N   G IP S
Sbjct:  298 DLSDNRLS----------GNIPQELGNCSSLETLKLND-NQLQGEIPPALSKLKKLQSLELFFNKLSGEIPIGIWKIQSLTQMLVYNNTLTGELPVEVTQLKHLKKLTLFNNGFYGDIPMS 407          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.207e-16
Identity = 46/124 (37.10%), Postives = 72/124 (58.06%), Query Frame = 3
Query:    6 VTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPES 377
            +TC+ + NR+ S+++   +L G++P+E+  L  L+TL     P L+GP+   I  L+ L  L +     +GP+PD I  L  LT L L+ N  SGTIP+S+ +L KL    +  N+L G +P S
Sbjct:   62 ITCN-NDNRVVSISLTNRNLKGKLPTEISTLSELQTLDLTGNPELSGPLPANIGNLRKLTFLSLMGCAFNGPIPDSIGNLEQLTRLSLNLNKFSGTIPASMGRLSKLYWFDIADNQLEGKLPVS 184          
The following BLAST results are available for this feature:
BLAST of FE659322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
PGIP_PYRCO3.040e-5279.37Polygalacturonase inhibitor OS=Pyrus communis GN=P... [more]
PGIP_VITVI1.012e-4773.02Polygalacturonase inhibitor OS=Vitis vinifera GN=p... [more]
PGIP1_ARATH1.616e-4570.31Polygalacturonase inhibitor 1 OS=Arabidopsis thali... [more]
PGIP2_ARATH4.553e-4064.06Polygalacturonase inhibitor 2 OS=Arabidopsis thali... [more]
PGIP1_PHAVU9.217e-2545.74Polygalacturonase inhibitor 1 OS=Phaseolus vulgari... [more]
PGIP3_PHAVU1.019e-2344.96Polygalacturonase inhibitor 3 OS=Phaseolus vulgari... [more]
PGIP2_PHAVU1.738e-2344.96Polygalacturonase inhibitor 2 OS=Phaseolus vulgari... [more]
PGIP1_ORYSJ1.377e-2045.53Polygalacturonase inhibitor 1 OS=Oryza sativa subs... [more]
PEPR2_ARATH6.398e-1843.09Leucine-rich repeat receptor-like protein kinase P... [more]
Y5977_ARATH1.207e-1637.10Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionA84 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659322 ID=FE659322; Name=FE659322; organism=Citrus sinensis; type=EST; length=382bp
ACTGCGTCACATGCGATCTCTCCACTAACCGCATCAATTCTCTCACCATC
TTCGCCGGAGATCTCCCCGGCCAGATCCCCTCCGAAGTTGGTGATCTTCC
TTACCTCGAAACCCTAATGTTTCACAAGCTACCCAGCCTCACTGGCCCCA
TACAACCCGCCATTGCCAAGCTCAAAAACCTGAAGACGCTACGTATTAGC
TGGACAAACATTTCTGGGCCGGTTCCTGATTTTATCAGCCAACTCACCAA
CTTAACATTCTTGGAGCTTTCATTTAACAATCTTTCTGGGACGATCCCAA
GTTCACTTTCGAAGCTGCAGAAGCTTGGCGCTCTTCATTTGGACAGAAAC
AAGCTTACGGGTTCAATCCCTGAGTCTTTTGG
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