FE659319

Overview
NameFE659319
Unique NameFE659319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FE659319_ssr643 microsatellite FE659319_ssr643:643..670. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2259 contig Csv1_Contig2259:222..1032. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FE659319 vs. ExPASy Swiss-Prot
Match: WUN1_SOLTU (Wound-induced protein 1 OS=Solanum tuberosum GN=WUN1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.809e-29
Identity = 67/107 (62.62%), Postives = 75/107 (70.09%), Query Frame = 2 
Query:  116 FVFVPLSITSFGPIVLAEGCDHSRQISWVHAWTVADGIITQVREYFNTSLTVTRFGKDLSGQSQRKKSPPSDFPSTAEINPVHCPSVWESSVSNRDGKSVPGLVLAL 436
            F F+  +I  FG +VL EGCD +R I+WVHAWTV DG+ITQVREYFNTSLTVTRFGK             SD  S   I  +HCPSVWESS+ NR GKSVPGLVLAL
Sbjct:   15 FQFLHKTIDVFGSVVLVEGCDPTRSITWVHAWTVTDGVITQVREYFNTSLTVTRFGK-------------SDISS---ITTLHCPSVWESSLPNRVGKSVPGLVLAL 105
The following BLAST results are available for this feature:
BLAST of FE659319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WUN1_SOLTU8.809e-2962.62Wound-induced protein 1 OS=Solanum tuberosum GN=WU... [more]
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Properties
Property NameValue
Genbank descriptionA79 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659319 ID=FE659319; Name=FE659319; organism=Citrus sinensis; type=EST; length=811bp
ACACAAGATCCTAGCCCCGGACCTAGAGTGGTGGTTCCATGGCCCGCCGA
CCCACCAGTTTATGATGCACCTTCTCACCGGCAGCACCACCGCATCGTCA
GCATCGCAAAGCTCCTTCGTATTCGTTCCTCTCTCGATCACATCGTTCGG
GCCCATTGTCCTCGCCGAGGGCTGTGATCACAGCCGTCAAATCAGCTGGG
TCCACGCCTGGACGGTCGCTGATGGGATAATTACTCAAGTCAGAGAATAC
TTCAACACTTCGCTTACCGTCACCCGCTTCGGTAAAGACTTGTCTGGTCA
AAGTCAGAGGAAGAAATCACCACCCTCTGATTTCCCATCAACAGCGGAGA
TTAATCCGGTGCATTGCCCCTCCGTTTGGGAGAGCAGCGTCTCCAACCGG
GACGGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAA
AAGGGACCGAGGTTGATCCTGTGCAGCCGTGTGTAGTATAATATTATACC
ATATTAACATATAAATAAAGGCTGCACGTGACGCGTGTCGCCCCCTGTGT
GGGCCGTCGCTTAGAGATGTGAGTGGCTGAGGCTCTGGTTGGGGGAGTGC
TTTGGGTTGTTTTCGCCTTTATTTTTGTGTCTGGCTTTCCGGGTTTGTTT
GTTTGTTTGTTTGTTTGTTTGATATGTCGGTCTTTCCGGGTCGGATCATG
ATGTGTGAACCCGAACTCGGTTGGTTGTATCCAGCTGTTGTTTATGTTAA
TTGGTGCTTTGATTATCGAATAAAAATTGGTTATTTTAATAAAAAAAAAA
AAAAAAGCTTG
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