FE659317

Overview
NameFE659317
Unique NameFE659317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length353
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10967 contig Csv1_Contig10967:353..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FE659317 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.677e-32
Identity = 62/112 (55.36%), Postives = 89/112 (79.46%), Query Frame = -3 
Query:    1 LYIVLIITPFIVLCPLYYYYQKHPVNYLLLGVFTIALSFAVGLTCAYTKGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIQILFPLGRISV 336
            + + L I PFI++ PL+ Y+QKHPVN +LL +FT++LSF VG++CA T+G ++L++ ILT  VV SLT YTFWAA++G DF+FLGP LF ++++L+V +FIQ+ FPLG  SV
Sbjct:   87 ILLFLCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSV 198
The following BLAST results are available for this feature:
BLAST of FE659317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BI1L_ARATH2.677e-3255.36BI1-like protein OS=Arabidopsis thaliana GN=At4g15... [more]
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Properties
Property NameValue
Genbank descriptionA73 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659317 ID=FE659317; Name=FE659317; organism=Citrus sinensis; type=EST; length=353bp
CACAGAAATCCTACCCAATGGAAATAGAATCTGAATAAAAGCAAAAACCA
GCAGGACCATTACAGCACCAAACAAGAAAGGCCCAAGAAAGTTGAAATCA
TGGCCTCTTCGTGCAGCCCAGAAAGTGTAGAGAGTGAGTGAAATAACCAC
CACAGCCGTCAATATTGCAGATTCCAGAATAACCTCCCCTTTGGTGTAAG
CACACGTCAAACCCACCGCAAACGAAAGAGCGATGGTGAAAACTCCAAGT
AAAAGATAATTCACTGGATGCTTCTGGTAATAGTAATACAACGGACACAA
CACAATGAAAGGCGTGATTATTAGCACAATATAGAGAGCAAGGCCGGCCC
CGG
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