FE659277

Overview
NameFE659277
Unique NameFE659277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length343
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659277 vs. ExPASy Swiss-Prot
Match: LPAT5_ARATH (Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=LPAT5 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.224e-15
Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = -1
Query:  191 FPEGTDFTEQKCIRSQKYAAENGLPILKSVLLPQTKGFCACLEDLRGSLDA 343
            FPEGTD+TE KC RS+K+AAENGLPIL +VLLP+TKGF +CL++L  SLDA
Sbjct:  178 FPEGTDYTEAKCQRSKKFAAENGLPILNNVLLPRTKGFVSCLQELSCSLDA 228          
BLAST of FE659277 vs. ExPASy Swiss-Prot
Match: LPAT4_ARATH (Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 OS=Arabidopsis thaliana GN=LPAT4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.883e-14
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = -1
Query:  191 FPEGTDFTEQKCIRSQKYAAENGLPILKSVLLPQTKGFCACLEDLRGSLDA 343
            FPEGTDFTE+KC RSQK+AAE GLP L +VLLP+T+GF  CLE L  SLDA
Sbjct:  183 FPEGTDFTEEKCKRSQKFAAEVGLPALSNVLLPKTRGFGVCLEVLHNSLDA 233          
The following BLAST results are available for this feature:
BLAST of FE659277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LPAT5_ARATH2.224e-1572.55Probable 1-acyl-sn-glycerol-3-phosphate acyltransf... [more]
LPAT4_ARATH1.883e-1472.55Probable 1-acyl-sn-glycerol-3-phosphate acyltransf... [more]
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Properties
Property NameValue
Genbank description444 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659277 ID=FE659277; Name=FE659277; organism=Citrus sinensis; type=EST; length=343bp
ACAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAAAATGACAGCTAT
ATTACATTAATATAATCGTCACAGACCAGGATTATTGGGAGACTTTGAAA
GAGTTACTACAGGCAGAGAACATATGCAGTTGAATAATACAAACAAGGAA
AGCATAGGGGAGAGAAAGAAAAAAAAGGGAAAAAGAAACCTGCATCCAGT
GACCCCCTCAAATCTTCCAAGCAGGCACAGAAGCCCTTTGTTTGAGGAAG
CAACACACTTTTTAGGATGGGTAAGCCATTTTCAGCTGCGTATTTTTGAC
TTCTTATGCATTTCTGTTCAGTGAAATCGGTGCCTTCAGGGAA
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