FE659271

Overview
NameFE659271
Unique NameFE659271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length334
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13678 contig Csv1_Contig13678:1..334. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A7_RABIT (Solute carrier family 12 member 7 OS=Oryctolagus cuniculus GN=SLC12A7 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.100e-21
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 1
Query:    1 TFLTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFLKAV-PAAGMFRETITKVNGTATPEPIQSPSLHDLQIYGIIVTIILCFIVF 333
            T LT++S+S IATNG +  GG YY+I R+LGPE G ++GLCF+LG   AGAMY+LG +E FL  + P A +F+          TPE   +  LH++++YG     ++  +VF
Sbjct:  188 TMLTAVSMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEIFLTYISPGAAVFQ--------AETPEGEAAALLHNMRVYGSCTLALMAVVVF 291          
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A7_HUMAN (Solute carrier family 12 member 7 OS=Homo sapiens GN=SLC12A7 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 1.042e-20
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 1
Query:    1 TFLTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFLKAV-PAAGMFRETITKVNGTATPEPIQSPSLHDLQIYGIIVTIILCFIVF 333
            T LT+IS+S IATNG +  GG YY+I R+LGPE G ++GLCF+LG   AGAMY+LG +E FL  + P A +F+         A         LH++++YG    +++  +VF
Sbjct:  164 TMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEIFLTYISPGAAIFQAEAAGGEAAA--------MLHNMRVYGTCTLVLMALVVF 267          
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A6_MOUSE (Solute carrier family 12 member 6 OS=Mus musculus GN=Slc12a6 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.822e-20
Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 1
Query:    1 TFLTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFL-KAVPAAGMFRETITKVNGTATPEPIQSPSLHDLQIYGIIVTIILCFIVF 333
            T LT+IS+S IATNG +  GG Y++I RALGPE G ++GLCF+LG   A AMY+LGA+E FL   VP A +FR         A         L+++++YG    +++  +VF
Sbjct:  231 TMLTAISMSAIATNGVVPAGGSYFMISRALGPEFGGAVGLCFYLGTTFAAAMYILGAIEIFLVYIVPRAAIFRSDDALKESAA--------MLNNMRVYGTAFLVLMVLVVF 334          
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A7_RAT (Solute carrier family 12 member 7 OS=Rattus norvegicus GN=Slc12a7 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.505e-19
Identity = 47/112 (41.96%), Postives = 71/112 (63.39%), Query Frame = 1
Query:    1 TFLTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFLKAV-PAAGMFRETITKVNGTATPEPIQSPSLHDLQIYGIIVTIILCFIVF 333
            T LT+IS+S IATNG +  GG YY+I R+LGPE G ++GLCF+LG   AGAMY+LG +E FL  + P+A +F+          T +   +  L+++++YG     ++  +VF
Sbjct:  164 TMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEIFLTYISPSAAIFQ--------AETADGEAAALLNNMRVYGSCALALMAVVVF 267          
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A7_MOUSE (Solute carrier family 12 member 7 OS=Mus musculus GN=Slc12a7 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.505e-19
Identity = 47/112 (41.96%), Postives = 71/112 (63.39%), Query Frame = 1
Query:    1 TFLTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFLKAV-PAAGMFRETITKVNGTATPEPIQSPSLHDLQIYGIIVTIILCFIVF 333
            T LT+IS+S IATNG +  GG YY+I R+LGPE G ++GLCF+LG   AGAMY+LG +E FL  + P+A +F+          T +   +  L+++++YG     ++  +VF
Sbjct:  164 TMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEIFLTYISPSAAIFQ--------AETADGEAAALLNNMRVYGSCALALMAVVVF 267          
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A6_HUMAN (Solute carrier family 12 member 6 OS=Homo sapiens GN=SLC12A6 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.353e-19
Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 1
Query:    1 TFLTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFL-KAVPAAGMFRETITKVNGTATPEPIQSPSLHDLQIYGIIVTIILCFIVF 333
            T LT+IS+S IATNG +  GG Y++I RALGPE G ++GLCF+LG   A AMY+LGA+E FL   VP A +F          A         L+++++YG    +++  +VF
Sbjct:  231 TMLTAISMSAIATNGVVPAGGSYFMISRALGPEFGGAVGLCFYLGTTFAAAMYILGAIEIFLVYIVPRAAIFHSDDALKESAA--------MLNNMRVYGTAFLVLMVLVVF 334          
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A4_MOUSE (Solute carrier family 12 member 4 OS=Mus musculus GN=Slc12a4 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.379e-19
Identity = 47/112 (41.96%), Postives = 71/112 (63.39%), Query Frame = 1
Query:    1 TFLTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFLKAV-PAAGMFRETITKVNGTATPEPIQSPSLHDLQIYGIIVTIILCFIVF 333
            T LT+IS+S IATNG +  GG Y++I R+LGPE G ++GLCF+LG   A AMY+LGA+E  L  + P A +F  + T          + S +L+++++YG I   ++  +VF
Sbjct:  164 TLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAAAMYILGAIEILLTYIAPPAAIFYPSGT--------HDMSSATLNNMRVYGTIFLTLMTLVVF 267          
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A4_RAT (Solute carrier family 12 member 4 OS=Rattus norvegicus GN=Slc12a4 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.469e-19
Identity = 47/112 (41.96%), Postives = 70/112 (62.50%), Query Frame = 1
Query:    1 TFLTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFLKAV-PAAGMFRETITKVNGTATPEPIQSPSLHDLQIYGIIVTIILCFIVF 333
            T LT+IS+S IATNG +  GG Y++I R+LGPE G ++GLCF+LG   A AMY+LGA+E  L  + P A +F  + T          + S +L+++++YG I    +  +VF
Sbjct:  164 TLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAAAMYILGAIEILLTYIAPPAAIFYPSGT--------HDMSSATLNNMRVYGTIFLTFMTLVVF 267          
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A4_RABIT (Solute carrier family 12 member 4 OS=Oryctolagus cuniculus GN=SLC12A4 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.754e-19
Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 1
Query:    1 TFLTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFLKAV-PAAGMFRETITKVNGTATPEPIQSPSLHDLQIYGIIVTIILCFIVF 333
            T LT+IS+S IATNG +  GG Y++I R+LGPE G ++GLCF+LG   A AMY+LGA+E  L  + P A +F  + T     AT        L+++++YG +    +  +VF
Sbjct:  164 TLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAAAMYILGAIEILLTYIAPPAAIFYPSGTHDTSNAT--------LNNMRVYGTVFLSFMTLVVF 267          
BLAST of FE659271 vs. ExPASy Swiss-Prot
Match: S12A5_RAT (Solute carrier family 12 member 5 OS=Rattus norvegicus GN=Slc12a5 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.173e-18
Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = 1
Query:    1 TFLTSISLSVIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGAMYVLGAVETFLKAV-PAAGMFRETITKVNGTATPEPIQSPSLHDLQIYGIIVTIILCFIVF 333
            T LT+IS+S IATNG +  GG YY+I R+LGPE G ++GLCF+LG   AGAMY+LG +E  L  + PA  +F+      +G A      +  L+++++YG  V   +  +VF
Sbjct:  166 TMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEILLAYLFPAMAIFK--AEDASGEA------AAMLNNMRVYGTCVLTCMATVVF 269          
The following BLAST results are available for this feature:
BLAST of FE659271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
S12A7_RABIT2.100e-2143.75Solute carrier family 12 member 7 OS=Oryctolagus c... [more]
S12A7_HUMAN1.042e-2042.86Solute carrier family 12 member 7 OS=Homo sapiens ... [more]
S12A6_MOUSE8.822e-2043.75Solute carrier family 12 member 6 OS=Mus musculus ... [more]
S12A7_RAT1.505e-1941.96Solute carrier family 12 member 7 OS=Rattus norveg... [more]
S12A7_MOUSE1.505e-1941.96Solute carrier family 12 member 7 OS=Mus musculus ... [more]
S12A6_HUMAN3.353e-1942.86Solute carrier family 12 member 6 OS=Homo sapiens ... [more]
S12A4_MOUSE4.379e-1941.96Solute carrier family 12 member 4 OS=Mus musculus ... [more]
S12A4_RAT7.469e-1941.96Solute carrier family 12 member 4 OS=Rattus norveg... [more]
S12A4_RABIT9.754e-1941.96Solute carrier family 12 member 4 OS=Oryctolagus c... [more]
S12A5_RAT2.173e-1842.86Solute carrier family 12 member 5 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank description422 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659271 ID=FE659271; Name=FE659271; organism=Citrus sinensis; type=EST; length=334bp
ACTTTCTTGACTTCTATATCTCTGAGTGTAATTGCAACAAATGGTGCGAT
GAAGGGTGGAGGACCATATTATCTCATTGGTCGTGCACTTGGTCCGGAGG
TTGGAGTTAGCATTGGACTCTGTTTTTTCCTTGGAAATGCTGTTGCTGGA
GCTATGTATGTGTTGGGAGCTGTTGAAACCTTTTTAAAAGCTGTGCCTGC
TGCTGGGATGTTTAGAGAGACTATCACAAAAGTAAATGGCACAGCAACGC
CAGAACCCATACAAAGTCCAAGTTTACACGACTTGCAAATTTATGGAATT
ATTGTGACTATCATCCTATGCTTTATTGTTTTCG
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