FE659257

Overview
NameFE659257
Unique NameFE659257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig132 contig Csv1_Contig132:610..1165. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FE659257 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 3 
Query:  195 VPANASGVQLQPKPETRVQKPADDRLFTWAAVGLTIAILVLLLRKFMKSNGHGAVFMD 368
            V A+ SG Q   +     QKP DDRLFTWAAVGLTIAI+VLLL+KF+KSNG+   FMD
Sbjct:  251 VKASVSGEQRMAR--RAAQKPVDDRLFTWAAVGLTIAIMVLLLKKFIKSNGYSTGFMD 306
The following BLAST results are available for this feature:
BLAST of FE659257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UBC32_ARATH3.652e-1263.79Ubiquitin carrier protein E2 32 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank description325 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659257 ID=FE659257; Name=FE659257; organism=Citrus sinensis; type=EST; length=556bp
CTCAGCTCAGCACCTGTGAAGAACAGCCTGGCAACAGGGAGGGTGAAGCA
CAGGCAAGTTCCATAGACGCCATGGTTGCGGGTGCTGGGGAAGGGCTCCC
AGCCCCAGTAGGTGATAGGATTATTGAAGAAGTTCAGGAGGATGTTCCTG
CCAGCGTGAATCCCAACCCCGTAGTGGCTGGAACATCAAGAGAGGTTCCT
GCCAACGCCTCTGGAGTCCAGCTTCAGCCAAAACCGGAGACTAGGGTTCA
AAAACCTGCTGATGATCGACTGTTCACATGGGCTGCTGTTGGACTTACTA
TTGCAATTTTGGTTCTTTTACTGAGGAAATTCATGAAATCTAATGGTCAT
GGTGCTGTTTTCATGGATGGTTCGTAGATATGCTATCGGTTTCGTCAAAT
CTGGGAGTTCAAAATTTCCAAGTCATAGTAGTTAAGGGAGAAATTATCAT
CAAGGGCATTAATCTTTATTGAAACAGTTTGTCGTATATATGATCTTTTA
TACCCCATGACTGTAATTTCATACGCAATTGTAAGCCAGATTGTCCTGTC
ATTTTG
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