FE659184

Overview
NameFE659184
Unique NameFE659184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length178
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8865 contig Csv1_Contig8865:73..250. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC3_ARATH (Probable cytochrome c At4g10040 OS=Arabidopsis thaliana GN=At4g10040 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.148e-26
Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = -1
Query:    2 MASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 163
            MASFDEAPPGN KAGEKIF+TKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG
Sbjct:    1 MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 54          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_CUCMA (Cytochrome c OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.815e-25
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASFDEAPPGN+KAGEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPG
Sbjct:    1 ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_ORYSJ (Cytochrome c OS=Oryza sativa subsp. japonica GN=CC-1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.044e-25
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = -1
Query:    2 MASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 163
            MASF EAPPGN KAGEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPG
Sbjct:    1 MASFSEAPPGNPKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPG 54          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_ORYSI (Cytochrome c OS=Oryza sativa subsp. indica GN=CC-1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.044e-25
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = -1
Query:    2 MASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 163
            MASF EAPPGN KAGEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPG
Sbjct:    1 MASFSEAPPGNPKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPG 54          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_ABUTH (Cytochrome c OS=Abutilon theophrasti PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.044e-25
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF +APPG+AKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG
Sbjct:    1 ASFQZAPPGBAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC2_ARATH (Probable cytochrome c At1g22840 OS=Arabidopsis thaliana GN=At1g22840 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.009e-25
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = -1
Query:    2 MASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 163
            MASFDEAPPGNAKAGEKIF+TKCAQCHTVE GAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 MASFDEAPPGNAKAGEKIFRTKCAQCHTVEAGAGHKQGPNLNGLFGRQSGTTAG 54          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_BRAOL (Cytochrome c OS=Brassica oleracea PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.537e-24
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASFDEAPPGN+KAGEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_BRANA (Cytochrome c OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.537e-24
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASFDEAPPGN+KAGEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_SESIN (Cytochrome c OS=Sesamum indicum PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.007e-24
Identity = 47/53 (88.68%), Postives = 52/53 (98.11%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF++APPG+ K+GEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPG
Sbjct:    1 ASFBZAPPGBVKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_RICCO (Cytochrome c OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF++APPG+ KAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFBZAPPGBVKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAG 53          
The following BLAST results are available for this feature:
BLAST of FE659184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CYC3_ARATH8.148e-2696.30Probable cytochrome c At4g10040 OS=Arabidopsis tha... [more]
CYC_CUCMA1.815e-2596.23Cytochrome c OS=Cucurbita maxima PE=1 SV=1[more]
CYC_ORYSJ4.044e-2594.44Cytochrome c OS=Oryza sativa subsp. japonica GN=CC... [more]
CYC_ORYSI4.044e-2594.44Cytochrome c OS=Oryza sativa subsp. indica GN=CC-1... [more]
CYC_ABUTH4.044e-2594.34Cytochrome c OS=Abutilon theophrasti PE=1 SV=1[more]
CYC2_ARATH9.009e-2594.44Probable cytochrome c At1g22840 OS=Arabidopsis tha... [more]
CYC_BRAOL1.537e-2494.34Cytochrome c OS=Brassica oleracea PE=1 SV=1[more]
CYC_BRANA1.537e-2494.34Cytochrome c OS=Brassica napus PE=1 SV=1[more]
CYC_SESIN2.007e-2488.68Cytochrome c OS=Sesamum indicum PE=1 SV=1[more]
CYC_RICCO3.423e-2490.57Cytochrome c OS=Ricinus communis PE=1 SV=1[more]

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Properties
Property NameValue
Genbank description82 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659184 ID=FE659184; Name=FE659184; organism=Citrus sinensis; type=EST; length=178bp
ACCCAGGTGTAGTCCCCGATTGCCTTCCAAACAATCCGTTCAAATTAGGA
CCTTGTTTGTGACCGGCGCCTTTCTCGACGGTGTGGCACTGAGCGCACTT
GGTCTTGAAGATCTTCTCTCCGGCCTTTGCATTGCCGGGAGGTGCCTCAT
CAAACGACGCCATTATTGTGGTGTTTTG
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