FE659176

Overview
NameFE659176
Unique NameFE659176
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length296
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13673 contig Csv1_Contig13673:1..296. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659176 vs. ExPASy Swiss-Prot
Match: ISU1_DEBHA (Iron sulfur cluster assembly protein 1, mitochondrial OS=Debaryomyces hansenii GN=ISU1 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.119e-29
Identity = 69/100 (69.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:    4 DCGIVLLEGP---DVSRVIIVVDDETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 294
            D G  L+  P   DV R+ I VDDETG I D  FKTFGCGSAIASSS  TE VKGK ++E + IKNT IAK LSLPPVKLHCSMLAEDAIK+AVKDY +K
Sbjct:   60 DVGTGLVGAPACGDVMRLQIQVDDETGVIKDVKFKTFGCGSAIASSSYLTELVKGKTIEEAVKIKNTAIAKELSLPPVKLHCSMLAEDAIKSAVKDYRSK 159          
BLAST of FE659176 vs. ExPASy Swiss-Prot
Match: ISCU_MOUSE (Iron-sulfur cluster assembly enzyme ISCU, mitochondrial OS=Mus musculus GN=Iscu PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.614e-29
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 1
Query:   34 DVSRVIIVVDDETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 294
            DV ++ I VD E G+IVDA FKTFGCGSAIASSS+ATEWVKGK ++E L+IKNT+IAK L LPPVKLHCSMLAEDAIKAA+ DY+ K
Sbjct:   72 DVMKLQIQVD-EKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLK 157          
BLAST of FE659176 vs. ExPASy Swiss-Prot
Match: ISCU_HUMAN (Iron-sulfur cluster assembly enzyme ISCU, mitochondrial OS=Homo sapiens GN=ISCU PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.614e-29
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 1
Query:   34 DVSRVIIVVDDETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 294
            DV ++ I VD E G+IVDA FKTFGCGSAIASSS+ATEWVKGK ++E L+IKNT+IAK L LPPVKLHCSMLAEDAIKAA+ DY+ K
Sbjct:   71 DVMKLQIQVD-EKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLK 156          
BLAST of FE659176 vs. ExPASy Swiss-Prot
Match: ISU1_KLULA (Iron sulfur cluster assembly protein 1, mitochondrial OS=Kluyveromyces lactis GN=ISU1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.816e-28
Identity = 61/87 (70.11%), Postives = 72/87 (82.76%), Query Frame = 1
Query:   34 DVSRVIIVVDDETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 294
            DV ++ I V+DETG I +  FKTFGCGSAIASSS  TE V+GK +++   IKNTEIA+ LSLPPVKLHCSMLAEDAIKAA+KDY+AK
Sbjct:   87 DVMKLQIQVNDETGVIENVKFKTFGCGSAIASSSYMTELVRGKTLEDAAKIKNTEIARELSLPPVKLHCSMLAEDAIKAAIKDYQAK 173          
BLAST of FE659176 vs. ExPASy Swiss-Prot
Match: ISU1_ASHGO (Iron sulfur cluster assembly protein 1, mitochondrial OS=Ashbya gossypii GN=ISU1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.983e-27
Identity = 65/101 (64.36%), Postives = 75/101 (74.26%), Query Frame = 1
Query:    1 TDCGIVLLEGP---DVSRVIIVVDDETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 294
            T+ G  L+  P   DV R+ I VDD TG I +  FKTFGCGSAIASSS  TE V+GK + +   IKNTEIA+ LSLPPVKLHCSMLAEDAIKAA+KDY +K
Sbjct:   47 TNVGTGLVGAPACGDVMRLQIQVDDSTGVIENVKFKTFGCGSAIASSSYMTELVRGKTLADAEKIKNTEIARELSLPPVKLHCSMLAEDAIKAAIKDYRSK 147          
BLAST of FE659176 vs. ExPASy Swiss-Prot
Match: ISU1_YEAST (Iron sulfur cluster assembly protein 1, mitochondrial OS=Saccharomyces cerevisiae GN=ISU1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.418e-27
Identity = 61/87 (70.11%), Postives = 69/87 (79.31%), Query Frame = 1
Query:   34 DVSRVIIVVDDETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 294
            DV R+ I V+D TG I D  FKTFGCGSAIASSS  TE V+G  + +   IKNTEIAK LSLPPVKLHCSMLAEDAIKAA+KDY++K
Sbjct:   71 DVMRLQIKVNDSTGVIEDVKFKTFGCGSAIASSSYMTELVQGMTLDDAAKIKNTEIAKELSLPPVKLHCSMLAEDAIKAAIKDYKSK 157          
BLAST of FE659176 vs. ExPASy Swiss-Prot
Match: NIFU_RICPR (NifU-like protein OS=Rickettsia prowazekii GN=nifU PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.864e-26
Identity = 59/87 (67.82%), Postives = 70/87 (80.46%), Query Frame = 1
Query:   34 DVSRVIIVVDDETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 294
            DV ++ I V D+   I DA FKTFGCGSAIASSS+ TEW+KGK +++   IKNTEIAK LSLPPVKLHCS+LAEDAIKAA+ DY+ K
Sbjct:   39 DVMKLQIEVGDDE-IITDAKFKTFGCGSAIASSSLVTEWIKGKSVEDAKEIKNTEIAKELSLPPVKLHCSLLAEDAIKAAIADYKQK 124          
BLAST of FE659176 vs. ExPASy Swiss-Prot
Match: ISU2_YEAST (Iron sulfur cluster assembly protein 2, mitochondrial OS=Saccharomyces cerevisiae GN=ISU2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.864e-26
Identity = 59/87 (67.82%), Postives = 70/87 (80.46%), Query Frame = 1
Query:   34 DVSRVIIVVDDETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 294
            DV ++ I V+D++G I +  FKTFGCGSAIASSS  TE V+G  + E + IKNTEIAK LSLPPVKLHCSMLAEDAIKAA+KDY+ K
Sbjct:   63 DVIKLQIQVNDKSGIIENVKFKTFGCGSAIASSSYMTELVRGMSLDEAVKIKNTEIAKELSLPPVKLHCSMLAEDAIKAAIKDYKTK 149          
BLAST of FE659176 vs. ExPASy Swiss-Prot
Match: ISU1_CANGA (Iron sulfur cluster assembly protein 1, mitochondrial OS=Candida glabrata GN=ISU1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.864e-26
Identity = 60/87 (68.97%), Postives = 68/87 (78.16%), Query Frame = 1
Query:   34 DVSRVIIVVDDETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 294
            DV R+ I V+D+TG I D  FKTFGCGSAIASSS  TE V G  + +   IKNT IAK LSLPPVKLHCSMLAEDAIKAA+KDY++K
Sbjct:  119 DVMRLQIKVNDKTGVIEDVKFKTFGCGSAIASSSYMTELVHGMTLDDAAKIKNTTIAKELSLPPVKLHCSMLAEDAIKAAIKDYKSK 205          
BLAST of FE659176 vs. ExPASy Swiss-Prot
Match: NIFU_SHIFL (NifU-like protein OS=Shigella flexneri GN=nifU PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.740e-26
Identity = 58/87 (66.67%), Postives = 72/87 (82.76%), Query Frame = 1
Query:   34 DVSRVIIVVDDETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 294
            DV ++ I V+DE G I DA FKT+GCGSAIASSS+ TEWVKGK + E  +IKNT+IA+ L LPPVK+HCS+LAEDAIKAA+ DY++K
Sbjct:   39 DVMKLQIKVNDE-GIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSK 124          
The following BLAST results are available for this feature:
BLAST of FE659176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
ISU1_DEBHA2.119e-2969.00Iron sulfur cluster assembly protein 1, mitochondr... [more]
ISCU_MOUSE3.614e-2974.71Iron-sulfur cluster assembly enzyme ISCU, mitochon... [more]
ISCU_HUMAN3.614e-2974.71Iron-sulfur cluster assembly enzyme ISCU, mitochon... [more]
ISU1_KLULA6.816e-2870.11Iron sulfur cluster assembly protein 1, mitochondr... [more]
ISU1_ASHGO1.983e-2764.36Iron sulfur cluster assembly protein 1, mitochondr... [more]
ISU1_YEAST4.418e-2770.11Iron sulfur cluster assembly protein 1, mitochondr... [more]
NIFU_RICPR2.864e-2667.82NifU-like protein OS=Rickettsia prowazekii GN=nifU... [more]
ISU2_YEAST2.864e-2667.82Iron sulfur cluster assembly protein 2, mitochondr... [more]
ISU1_CANGA2.864e-2668.97Iron sulfur cluster assembly protein 1, mitochondr... [more]
NIFU_SHIFL3.740e-2666.67NifU-like protein OS=Shigella flexneri GN=nifU PE=... [more]

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Properties
Property NameValue
Genbank description50 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659176 ID=FE659176; Name=FE659176; organism=Citrus sinensis; type=EST; length=296bp
ACCGACTGTGGCATCGTTCTTCTCGAAGGACCCGACGTTTCGCGGGTTAT
TATAGTGGTCGATGACGAGACTGGTCAGATCGTCGACGCCTGCTTCAAGA
CCTTTGGCTGTGGCTCGGCCATCGCTTCATCTTCTGTTGCAACGGAATGG
GTGAAAGGGAAGCAGATGCAGGAAGTCTTGTCCATTAAAAACACGGAAAT
TGCAAAACATCTTTCTCTACCACCTGTTAAACTGCATTGCAGCATGCTTG
CTGAAGATGCTATCAAGGCTGCTGTAAAAGATTACGAAGCTAAACG
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