FE659138

Overview
NameFE659138
Unique NameFE659138
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7428 contig Csv1_Contig7428:577..978. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FE659138 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.543e-11
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3 
Query:    3 ATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 110
            ATSK+RFRRELDG+HYEIQATDPTEMDLE LR RA+
Sbjct:  108 ATSKERFRRELDGVHYEIQATDPTEMDLEVLRERAH 143
The following BLAST results are available for this feature:
BLAST of FE659138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ADF_VITVI2.543e-1186.11Actin-depolymerizing factor OS=Vitis vinifera PE=2... [more]
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Properties
Property NameValue
Genbank descriptionC77 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659138 ID=FE659138; Name=FE659138; organism=Citrus sinensis; type=EST; length=400bp
ACGCCACATCTAAAGACAGATTTCGACGGGAGCTGGATGGTATCCACTAT
GAGATTCAGGCTACTGATCCTACAGAGATGGATCTTGAAGAGCTTAGAAA
CCGTGCAAACTGAAGAGTCTGCAGTTTTGCAGTTTCTTCCTTCCATGAAA
AAAATCAGCAAGGGGTTCTGCCAACTGTTGCTCCTTGCTTCATTAATCTA
TGTGCAAAAATCTATGCGTAATCTTCGAATAACTGGCAATGTGGGAAGAC
TGATTGGGCTGAGGTTATCTTGTTGTGGTGAAATTAGCTTCCCAGTGGTT
TATTGCTACTCTGATGAATATAAGTTTGTTTGTTGGGTATTTGGAAATCC
TAGAACATATTATCGTAACATTGATCTCTAATTCATATTCGCTGTCCTTG
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