FE659065

Overview
NameFE659065
Unique NameFE659065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length255
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4590 contig Csv1_Contig4590:507..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659065 vs. ExPASy Swiss-Prot
Match: UMP3_ARATH (Uncharacterized protein At5g10860, mitochondrial OS=Arabidopsis thaliana GN=At5g10860 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.698e-29
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 3
Query:    3 EENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 209
            EENKLITV+P+TKVLRAMQLMTDNRIRHIPVI DKGMIGMVSIGDVVRAVV EHREEL RLNA+IQGGY
Sbjct:  138 EENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQGGY 206          
The following BLAST results are available for this feature:
BLAST of FE659065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UMP3_ARATH2.698e-2991.30Uncharacterized protein At5g10860, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionC4 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659065 ID=FE659065; Name=FE659065; organism=Citrus sinensis; type=EST; length=255bp
CTGAAGAGAACAAGCTGATCACAGTCTCACCTGACACCAAAGTTCTGCGG
GCAATGCAATTGATGACAGATAACCGTATTCGGCACATTCCGGTAATTGA
TGACAAGGGAATGATCGGCATGGTGTCCATTGGAGATGTTGTTCGGGCTG
TGGTGAGTGAGCATCGTGAGGAGTTAAACCGCCTGAATGCTTTTATACAA
GGAGGTTACTAGATGATGATGACAAGATGAAATGTTGTGATGCATGTTTT
TTGAG
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