EY720223

Overview
NameEY720223
Unique NameEY720223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720223 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 4.912e-17
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 1
Query:  157 SSDCVRIRASSSMAAENKNKNKNVQVFDSEEDLAVSLDKYTADLSAKFGKEKGSFTVVLSGGALIDSLRRLVEP 378
            ++DC     +++ AA    K K V +FD+EEDLAVSL KYTA+LSAK   E+G+FTVVLSGG+LI ++R+L EP
Sbjct:   57 ATDC-----AAAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEP 125          

HSP 2 Score: 25.7942 bits (55), Expect = 4.912e-17
Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  360 QEISGTPYVDSVDWARGMCFGLTE 431
            ++++  PY+DSVDW++   F + E
Sbjct:  120 RKLAEPPYLDSVDWSKWHVFWVDE 143          

HSP 3 Score: 21.9422 bits (45), Expect = 4.912e-17
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 2
Query:  410 HVFWVDGGGVPR 445
            HVFWVD   VP+
Sbjct:  137 HVFWVDERVVPK 148          
BLAST of EY720223 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.360e-17
Identity = 39/65 (60.00%), Postives = 51/65 (78.46%), Query Frame = 1
Query:  184 SSSMAAENKNKNKNVQVFDSEEDLAVSLDKYTADLSAKFGKEKGSFTVVLSGGALIDSLRRLVEP 378
            +++ AA    K K V +FD+EEDLAVSL KYTA+LSAK   E+G+FTVVLSGG+LI ++R+L EP
Sbjct:   61 AAAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEP 125          

HSP 2 Score: 25.7942 bits (55), Expect = 6.360e-17
Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  360 QEISGTPYVDSVDWARGMCFGLTE 431
            ++++  PY+DSVDW++   F + E
Sbjct:  120 RKLAEPPYLDSVDWSKWHVFWVDE 143          

HSP 3 Score: 21.9422 bits (45), Expect = 6.360e-17
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 2
Query:  410 HVFWVDGGGVPR 445
            HVFWVD   VP+
Sbjct:  137 HVFWVDERVVPK 148          
BLAST of EY720223 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.099e-15
Identity = 40/74 (54.05%), Postives = 53/74 (71.62%), Query Frame = 1
Query:  154 KSSDCVRIRASSSMAAENKNKNKNVQVFDSEEDLAVSLDKYTADLSAKFGKEKGSFTVVLSGGALIDSLRRLVE 375
            KSSD  R   S +     K + K V+++D EE+L + L K+TADLS KF KE+G+FTVV+SGG+LI SLR+LVE
Sbjct:   59 KSSDTRRKVKSMATTNIGKEEKKRVEIYDLEENLVIDLAKFTADLSDKFCKERGAFTVVVSGGSLIKSLRKLVE 132          

HSP 2 Score: 28.1054 bits (61), Expect = 1.099e-15
Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  375 TPYVDSVDWARGMCFGLTE 431
            +PYVDS+DWAR   F + E
Sbjct:  133 SPYVDSIDWARWHFFWVDE 151          
The following BLAST results are available for this feature:
BLAST of EY720223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
6PGL4_ORYSI4.912e-1755.41Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSJ6.360e-1760.00Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH1.099e-1554.05Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-003-G02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720223 ID=EY720223; Name=EY720223; organism=Citrus sinensis; type=EST; length=787bp
CACGCGTCCGGTCACCACACTTCGCTCGTCTCTTTCTCCACTTGCTTTCT
TCCAAAATCACTTTATTCCAAAACCCGCTTTCAGTTTCAGTTTCAGTTAC
TCAGAAGACCAAACTCACTCCTCCAATTTCGAAACATTTCCCTTGATCGG
AACAAATCATCGGACTGCGTGAGAATCAGGGCATCATCATCAATGGCTGC
CGAGAATAAGAACAAGAACAAGAACGTACAAGTTTTTGACTCAGAGGAAG
ATCTGGCTGTGTCTTTGGACAAATACACCGCCGATCTATCTGCCAAGTTC
GGTAAAGAGAAGGGCTCCTTCACTGTCGTCTTATCCGGTGGTGCTCTCAT
CGACTCCCTCAGGAGATTAGTGGAACCCCGTATGTAGATTCTGTTGACTG
GGCGAGGGGCATGTGTTTTGGGTTGACGGAGGAGGGGTGCCAAGGATCGC
TCTGGTCCGGCTGGTTAGGTTACGTAGGGATGTTGGTGATGGGGGGGTAA
TAGTACATTGGGGTGGGTTTGGTGGTTCAGGAGTCATTAAGGTGCCGCTG
GCGCGACCGGAAGGGAGGGAGTGGGATGTGGGATGGGAGGGAAGGGGCGG
TAGACCGTCACCTACAAGGAGGGATCAACTCCAGGGGGGGGGTGAGGGGG
AGGCGGATGTATCGATGGGGGCTGCGAGGCGAGGTGAGGAGGGGGGGTGG
GTTGTAGGGGGGGGTGATGGTCATGGTTGAGTTGGGATGGGGTTTGGGGG
TCGGGGTGGGTGTGGTGGGGGGGGTGCCGGGCTGGTT
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