EY720219

Overview
NameEY720219
Unique NameEY720219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY720219 vs. ExPASy Swiss-Prot
Match: GDIA_PANTR (Rab GDP dissociation inhibitor alpha OS=Pan troglodytes GN=GDI1 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.827e-47
Identity = 98/191 (51.31%), Postives = 131/191 (68.59%), Query Frame = 2 
Query:   23 KYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTQVTTIELIAKYGLDDNTIDFIGHALALHTDDRDLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEPPHALARLRAGYGGSYM*NKTEGNVKFEE*CKVSVSNFNGKEGRAQEGSATPPY 595
            +YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    +  ++  K+ L  + IDF GHALAL+  D  L++P L+TV R+KLY+ES+AR+ G SPY+YPLYGLGE P   ARL A YGG+YM NK   ++  E    V V +  G+  R ++    P Y
Sbjct:   98 RYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSY 286
[Close]
BLAST of EY720219 vs. ExPASy Swiss-Prot
Match: GDIA_MOUSE (Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1 SV=3)

HSP 1 Score: 188.734 bits (478), Expect = 3.827e-47
Identity = 97/191 (50.79%), Postives = 131/191 (68.59%), Query Frame = 2 
Query:   23 KYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTQVTTIELIAKYGLDDNTIDFIGHALALHTDDRDLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEPPHALARLRAGYGGSYM*NKTEGNVKFEE*CKVSVSNFNGKEGRAQEGSATPPY 595
            +YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    +  ++  K+ L  + IDF GHALAL+  D  L++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGE P   ARL A YGG+YM NK   ++  E    V V +  G+  R ++    P Y
Sbjct:   98 RYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSY 286
[Close]
BLAST of EY720219 vs. ExPASy Swiss-Prot
Match: GDIA_HUMAN (Rab GDP dissociation inhibitor alpha OS=Homo sapiens GN=GDI1 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.827e-47
Identity = 98/191 (51.31%), Postives = 131/191 (68.59%), Query Frame = 2 
Query:   23 KYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTQVTTIELIAKYGLDDNTIDFIGHALALHTDDRDLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEPPHALARLRAGYGGSYM*NKTEGNVKFEE*CKVSVSNFNGKEGRAQEGSATPPY 595
            +YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    +  ++  K+ L  + IDF GHALAL+  D  L++P L+TV R+KLY+ES+AR+ G SPY+YPLYGLGE P   ARL A YGG+YM NK   ++  E    V V +  G+  R ++    P Y
Sbjct:   98 RYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSY 286
[Close]
BLAST of EY720219 vs. ExPASy Swiss-Prot
Match: GDIA_BOVIN (Rab GDP dissociation inhibitor alpha OS=Bos taurus GN=GDI1 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.827e-47
Identity = 97/191 (50.79%), Postives = 131/191 (68.59%), Query Frame = 2 
Query:   23 KYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTQVTTIELIAKYGLDDNTIDFIGHALALHTDDRDLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEPPHALARLRAGYGGSYM*NKTEGNVKFEE*CKVSVSNFNGKEGRAQEGSATPPY 595
            +YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    +  ++  K+ L  + IDF GHALAL+  D  L++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGE P   ARL A YGG+YM NK   ++  E    V V +  G+  R ++    P Y
Sbjct:   98 RYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSY 286
[Close]
BLAST of EY720219 vs. ExPASy Swiss-Prot
Match: GDIA_RAT (Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus GN=Gdi1 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.998e-47
Identity = 97/191 (50.79%), Postives = 131/191 (68.59%), Query Frame = 2 
Query:   23 KYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTQVTTIELIAKYGLDDNTIDFIGHALALHTDDRDLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEPPHALARLRAGYGGSYM*NKTEGNVKFEE*CKVSVSNFNGKEGRAQEGSATPPY 595
            +YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    +  ++  K+ L  + IDF GHALAL+  D  L++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGE P   ARL A YGG+YM NK   ++  E    V V +  G+  R ++    P Y
Sbjct:   98 RYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSY 286
[Close]
BLAST of EY720219 vs. ExPASy Swiss-Prot
Match: GDIA_PONPY (Rab GDP dissociation inhibitor alpha OS=Pongo pygmaeus GN=GDI1 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.998e-47
Identity = 97/191 (50.79%), Postives = 131/191 (68.59%), Query Frame = 2 
Query:   23 KYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTQVTTIELIAKYGLDDNTIDFIGHALALHTDDRDLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEPPHALARLRAGYGGSYM*NKTEGNVKFEE*CKVSVSNFNGKEGRAQEGSATPPY 595
            +YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    +  ++  K+ L  + IDF GHALAL+  D  L++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGE P   ARL A YGG+YM NK   ++  E    V V +  G+  R ++    P Y
Sbjct:   98 RYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSY 286
[Close]
BLAST of EY720219 vs. ExPASy Swiss-Prot
Match: GDIA_MACFA (Rab GDP dissociation inhibitor alpha OS=Macaca fascicularis GN=GDI1 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.998e-47
Identity = 97/191 (50.79%), Postives = 131/191 (68.59%), Query Frame = 2 
Query:   23 KYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTQVTTIELIAKYGLDDNTIDFIGHALALHTDDRDLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEPPHALARLRAGYGGSYM*NKTEGNVKFEE*CKVSVSNFNGKEGRAQEGSATPPY 595
            +YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    +  ++  K+ L  + IDF GHALAL+  D  L++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGE P   ARL A YGG+YM NK   ++  E    V V +  G+  R ++    P Y
Sbjct:   98 RYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSY 286
[Close]
BLAST of EY720219 vs. ExPASy Swiss-Prot
Match: GDIA_CANFA (Rab GDP dissociation inhibitor alpha OS=Canis familiaris GN=GDI1 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.998e-47
Identity = 96/191 (50.26%), Postives = 131/191 (68.59%), Query Frame = 2 
Query:   23 KYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTQVTTIELIAKYGLDDNTIDFIGHALALHTDDRDLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEPPHALARLRAGYGGSYM*NKTEGNVKFEE*CKVSVSNFNGKEGRAQEGSATPPY 595
            +YL FK V+GSF+Y  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    +  ++  K+ L  + IDF GHALAL+  D  L++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGE P   ARL A YGG+YM NK   ++  E    V V +  G+  R ++    P Y
Sbjct:   98 RYLDFKVVEGSFIYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQSTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSY 286
[Close]
BLAST of EY720219 vs. ExPASy Swiss-Prot
Match: GDIB_BOVIN (Rab GDP dissociation inhibitor beta OS=Bos taurus GN=GDI2 PE=2 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 4.231e-46
Identity = 94/198 (47.47%), Postives = 132/198 (66.67%), Query Frame = 2 
Query:   23 KYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTQVTTIELIAKYGLDDNTIDFIGHALALHTDDRDLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEPPHALARLRAGYGGSYM*NKTEGNVKFEE*CKVSVSNFNGKEGRAQEGSATPPYAVPKCDE 616
            +YL FK  +GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DENDP+T EG+D  + +  E+  K+ L  + IDF GHALAL+  D  L++P  +T+ R+KLY+ES+AR+ G SPY+YPLYGLGE P   ARL A YGG+YM NK    +  +    + V +  G+  R ++    P Y   + ++
Sbjct:   98 RYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGIDPKKTSMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIMQNGKVIGVKS-EGEIARCKQLICDPSYVKDRVEK 293
[Close]
BLAST of EY720219 vs. ExPASy Swiss-Prot
Match: GDIB_PIG (Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.217e-46
Identity = 94/198 (47.47%), Postives = 131/198 (66.16%), Query Frame = 2 
Query:   23 KYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTQVTTIELIAKYGLDDNTIDFIGHALALHTDDRDLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEPPHALARLRAGYGGSYM*NKTEGNVKFEE*CKVSVSNFNGKEGRAQEGSATPPYAVPKCDE 616
            +YL FK  +GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DENDP+T EG+D  +    E+  K+ L  + IDF GHALAL+  D  L++P  +T+ R+KLY+ES+AR+ G SPY+YPLYGLGE P   ARL A YGG+YM NK    +  +    + V +  G+  R ++    P Y   + ++
Sbjct:   98 RYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIVQNGKVIGVKS-EGEIARCKQLICDPSYVKDRVEK 293
The following BLAST results are available for this feature:
BLAST of EY720219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
GDIA_PANTR3.827e-4751.31Rab GDP dissociation inhibitor alpha OS=Pan troglo... [more]
GDIA_MOUSE3.827e-4750.79Rab GDP dissociation inhibitor alpha OS=Mus muscul... [more]
GDIA_HUMAN3.827e-4751.31Rab GDP dissociation inhibitor alpha OS=Homo sapie... [more]
GDIA_BOVIN3.827e-4750.79Rab GDP dissociation inhibitor alpha OS=Bos taurus... [more]
GDIA_RAT4.998e-4750.79Rab GDP dissociation inhibitor alpha OS=Rattus nor... [more]
GDIA_PONPY4.998e-4750.79Rab GDP dissociation inhibitor alpha OS=Pongo pygm... [more]
GDIA_MACFA4.998e-4750.79Rab GDP dissociation inhibitor alpha OS=Macaca fas... [more]
GDIA_CANFA4.998e-4750.26Rab GDP dissociation inhibitor alpha OS=Canis fami... [more]
GDIB_BOVIN4.231e-4647.47Rab GDP dissociation inhibitor beta OS=Bos taurus ... [more]
GDIB_PIG7.217e-4647.47Rab GDP dissociation inhibitor beta OS=Sus scrofa ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-003-F09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720219 ID=EY720219; Name=EY720219; organism=Citrus sinensis; type=EST; length=906bp
CACGCCGTCGTACTGATGTTACAAGTATCTGTACTTCAAAGCTGTGGATG
GCAGCTTCGTCTATAATAAAGGAAAGGTCCATAAGGTGCCAGCAACTGAT
ATGGAAGCGCTCAAATCTCCACTCATGGGTATTTTTGAGAAGCGCCGTGC
ACGCAAGTTTTTCATTTATGTGCAAGATTATGATGAAAATGATCCCAAAA
CACACGAGGGAATGGACTTGACCCAGGTGACCACTATAGAGTTGATTGCG
AAGTATGGTCTTGATGACAACACTATTGACTTCATTGGTCATGCATTGGC
ACTTCATACAGATGATCGTGACTTAAACGAACCTGCTCTTGATACAGTGA
AGAGAATGAAGTTATACGCAGAGTCTATTGCACGATTTCAAGGAGGATCA
CCATACATTTACCCTCTGTATGGGCTTGGAGAGCCGCCTCACGCCCTTGC
CCGGCTGAGAGCTGGTTATGGTGGGAGCTATATGTAGAATAAAACCGAGG
GCAACGTAAAGTTTGAAGAATAATGTAAAGTATCCGTGTCCAATTTTAAC
GGGAAAGAGGGACGCGCGCAAGAAGGGTCCGCGACCCCCCCATATGCTGT
CCCCAAATGTGACGAAGAGTGGGCTCGTTCCTAGAGCCATCGCTTGGCAG
ACCCCCCCAACGTCAACACTCGGTCATCCCTTATCACATCTTGTGACACC
TGCCCCGACACCGGGCGGGGCCCCACCTCCCCACCCACATCCCAAAGCCC
AAACCCACTCCACCCCATCCACAACCAGCCACCGCGATCAAGTAGCGCGC
GCCTCCTCCACACACACCCACCACCACTCCGACTCCACACCACGCATTAC
CGTCTGGGCTCTAGGAAACCAAGCACCCACCCACGCAACGACCGCGCGCA
GCGGAG
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