EY720031

Overview
NameEY720031
Unique NameEY720031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720031 vs. ExPASy Swiss-Prot
Match: YJIR_ECOLI (Uncharacterized HTH-type transcriptional regulator yjiR OS=Escherichia coli (strain K12) GN=yjiR PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.968e-54
Identity = 102/183 (55.74%), Postives = 130/183 (71.04%), Query Frame = 2
Query:    2 ALLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVVLCSSFSKTLAPGLRIGWVAPGRYLERVLHMKYISTGATATQPQIAIAEFLKNGHFEPHLRRMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSFMLWVELPEGFDTLKLNRLLVDEGVQIAVGSIFSASXQYRXLLRMNYA 550
            A+L+LAQR D+ I EDDVYGELA  YPRPRTI S+D DGRV+LCSSFSK++APGLR+GWVAPGRY ++++HMKY  +       Q+A A F+  GH+  H+RRMR  YQRN  L   W+  YFP     +RP+G F+LW+ELPE  D + + R L    +Q+A GSIFSAS +YR  LR+N A
Sbjct:  265 AVLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQMAAATFVLEGHYHRHIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDMVCVARQLCRMKIQVAAGSIFSASGKYRNCLRINCA 447          
BLAST of EY720031 vs. ExPASy Swiss-Prot
Match: YDCR_ECOLI (Uncharacterized HTH-type transcriptional regulator ydcR OS=Escherichia coli (strain K12) GN=ydcR PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29
Identity = 63/182 (34.62%), Postives = 101/182 (55.49%), Query Frame = 2
Query:    5 LLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVVLCSSFSKTLAPGLRIGWVAPGRYLERVLHMKYISTGATATQPQIAIAEFLKNGHFEPHLRRMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSFMLWVELPEGFDTLKLNRLLVDEGVQIAVGSIFSASXQYRXLLRMNYA 550
            L+ L  +++V +IEDDVY EL +   +P   K++D    V+ CSSFSK L PG RIGWVA G++  ++  ++ +ST +T++  Q+A+ ++L    ++ HLRR+R Q    +      + RY PA  +       + LW+ELPE  D  +L+   +   + IA G +FS    +    R N A
Sbjct:  265 LVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWDRHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHNDSGYFLWLELPEPLDAGELSLAALTHHISIAPGKMFSTGENWSRFFRFNTA 446          
BLAST of EY720031 vs. ExPASy Swiss-Prot
Match: Y104_SULSO (Uncharacterized aminotransferase SSO0104 OS=Sulfolobus solfataricus GN=SSO0104 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26
Identity = 64/183 (34.97%), Postives = 101/183 (55.19%), Query Frame = 2
Query:    5 LLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVVLCSSFSKTLAPGLRIGWV-APGRYLERVLHMKYISTGATATQPQIAIAEFLKNGHFEPHLRRMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSFMLWVELPEGFDTLKLNRLLVDEGVQIAVGSIFSASXQYRXLLRMNYA 550
            LL +A ++D  I EDD YG L +    P  IK+FD++GRV+  S+FSK LAPGLR+GWV A   +++ +   K      T +  Q    E ++ G  + +L ++R  Y+  RD+ML+ +  YFP   R ++P G   ++  LP+  DT K+    +  GV    GS F A    +  +R+N++
Sbjct:  195 LLEIASKYDFLIFEDDAYGFLVFEGESPPPIKAFDKEGRVIYTSTFSKILAPGLRLGWVIAHEDFIKEMELYKQNVDLHTPSLSQYIAMEAIRRGIIQNNLPKIRRVYKEKRDVMLEAIETYFPNDARWTKPVGGMFVFAWLPQKIDTTKMLEKALQRGVAYVPGSSFYADYSGKNTMRINFS 377          
BLAST of EY720031 vs. ExPASy Swiss-Prot
Match: YDFD_BACSU (Uncharacterized HTH-type transcriptional regulator ydfD OS=Bacillus subtilis GN=ydfD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20
Identity = 56/183 (30.60%), Postives = 101/183 (55.19%), Query Frame = 2
Query:    5 LLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVVLCSSFSKTLAPGLRIGW-VAPGRYLERVLHMKYISTGATATQPQIAIAEFLKNGHFEPHLRRMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSFMLWVELPEGFDTLKLNRLLVDEGVQIAVGSIFSASXQYRXLLRMNYA 550
            +L +++   + IIEDD+Y EL      P  IK+ D++G V+   S SKTL+PGLRIGW V P   +ER+  +K  +   +++  Q   AE+  +GH++ H+ ++R Q +  R+L L  +  +       + P+G F +W+++        L    + +G+ I +GSI+  + +    +R++YA
Sbjct:  278 ILAVSENTQLPIIEDDIYRELWIDEIPPYPIKTIDKNGHVLYIGSLSKTLSPGLRIGWIVGPEPVIERLSDIKMQTDYGSSSLSQRVAAEWFTSGHYQQHVEKVRQQLKVRRELALSALETHLKEVATWNIPKGGFFVWIKILPSISMKLLYTKALSKGILINLGSIY--AQEKGNYIRLSYA 458          
BLAST of EY720031 vs. ExPASy Swiss-Prot
Match: YISV_BACSU (Uncharacterized HTH-type transcriptional regulator yisV OS=Bacillus subtilis GN=yisV PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.147e-20
Identity = 55/183 (30.05%), Postives = 97/183 (53.01%), Query Frame = 2
Query:    5 LLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVVLCSSFSKTLAPGLRIGWVA-PGRYLERVLHMKYISTGATATQPQIAIAEFLKNGHFEPHLRRMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSFMLWVELPEGFDTLKLNRLLVDEGVQIAVGSIFSASXQYRXLLRMNYA 550
            +++L+++  + IIEDD YG+L +    P+ +K+ D +G ++   +FSKT++PGLRIGW+A P   +ER+  +K  +   ++   Q A AE+L  G++E HL  +R + +  RD  + ++ RY         P G F +WV   +     +    L+   V +  G I+    +    L  +YA
Sbjct:  280 IISLSKKEQMPIIEDDAYGDLWFEEKPPQPLKAMDHEGNILYLGAFSKTVSPGLRIGWLAGPEPVIERLADIKMQTDYGSSGLSQWAAAEWLSQGYYEEHLTWVRRKLKERRDAAVHFLERYAGDIATWRIPAGGFYIWVTFHKNLPVSRFFYELLKRQVLVNPGYIYDGEDRNSIRLSYSYA 462          
BLAST of EY720031 vs. ExPASy Swiss-Prot
Match: NORG_STAAC (HTH-type transcriptional regulator norG OS=Staphylococcus aureus (strain COL) GN=norG PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 56/184 (30.43%), Postives = 104/184 (56.52%), Query Frame = 2
Query:    5 LLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVVLCSSFSKTLAPGLRIGW-VAPGRYLERVLHMKYISTGATATQPQIAIAEFLKNGHFEPHLRRMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSFMLWVELPEGFDTLKL-NRLLVDEGVQIAVGSIFSASXQYRXLLRMNYA 550
            ++T ++R ++ IIEDD++ ++ +S P P +IK++D+ G+V+  SSFSKT+AP +RIGW VA  + +E++  ++      ++   Q+ + E LKN  ++ HL ++R   +  RD ML+ ++  F        P G + +W+      D   L   LL  E + I  G I+ +  +    +R+++A
Sbjct:  242 IITYSERHNIPIIEDDIFRDIFFSDPTP-SIKTYDKLGKVIHISSFSKTIAPAIRIGWIVASEKIIEQLADVRMQIDYGSSILSQMVVYEMLKNKSYDKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLSKEKILINPGYIYGSKEK---SIRLSFA 421          
BLAST of EY720031 vs. ExPASy Swiss-Prot
Match: NORG_STAA8 (HTH-type transcriptional regulator norG OS=Staphylococcus aureus (strain NCTC 8325) GN=norG PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 56/184 (30.43%), Postives = 104/184 (56.52%), Query Frame = 2
Query:    5 LLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVVLCSSFSKTLAPGLRIGW-VAPGRYLERVLHMKYISTGATATQPQIAIAEFLKNGHFEPHLRRMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSFMLWVELPEGFDTLKL-NRLLVDEGVQIAVGSIFSASXQYRXLLRMNYA 550
            ++T ++R ++ IIEDD++ ++ +S P P +IK++D+ G+V+  SSFSKT+AP +RIGW VA  + +E++  ++      ++   Q+ + E LKN  ++ HL ++R   +  RD ML+ ++  F        P G + +W+      D   L   LL  E + I  G I+ +  +    +R+++A
Sbjct:  242 IITYSERHNIPIIEDDIFRDIFFSDPTP-SIKTYDKLGKVIHISSFSKTIAPAIRIGWIVASEKIIEQLADVRMQIDYGSSILSQMVVYEMLKNKSYDKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLSKEKILINPGYIYGSKEK---SIRLSFA 421          
BLAST of EY720031 vs. ExPASy Swiss-Prot
Match: NORG_STAA3 (HTH-type transcriptional regulator norG OS=Staphylococcus aureus (strain USA300) GN=norG PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 56/184 (30.43%), Postives = 104/184 (56.52%), Query Frame = 2
Query:    5 LLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVVLCSSFSKTLAPGLRIGW-VAPGRYLERVLHMKYISTGATATQPQIAIAEFLKNGHFEPHLRRMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSFMLWVELPEGFDTLKL-NRLLVDEGVQIAVGSIFSASXQYRXLLRMNYA 550
            ++T ++R ++ IIEDD++ ++ +S P P +IK++D+ G+V+  SSFSKT+AP +RIGW VA  + +E++  ++      ++   Q+ + E LKN  ++ HL ++R   +  RD ML+ ++  F        P G + +W+      D   L   LL  E + I  G I+ +  +    +R+++A
Sbjct:  242 IITYSERHNIPIIEDDIFRDIFFSDPTP-SIKTYDKLGKVIHISSFSKTIAPAIRIGWIVASEKIIEQLADVRMQIDYGSSILSQMVVYEMLKNKSYDKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLSKEKILINPGYIYGSKEK---SIRLSFA 421          
BLAST of EY720031 vs. ExPASy Swiss-Prot
Match: NORG_STAAN (HTH-type transcriptional regulator norG OS=Staphylococcus aureus (strain N315) GN=norG PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 56/184 (30.43%), Postives = 103/184 (55.98%), Query Frame = 2
Query:    5 LLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVVLCSSFSKTLAPGLRIGW-VAPGRYLERVLHMKYISTGATATQPQIAIAEFLKNGHFEPHLRRMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSFMLWVELPEGFDTLKL-NRLLVDEGVQIAVGSIFSASXQYRXLLRMNYA 550
            ++T ++R ++ IIEDD++ ++ +S P P  IK++D+ G+V+  SSFSKT+AP +RIGW VA  + +E++  ++      ++   Q+ + E LKN  ++ HL ++R   +  RD ML+ ++  F        P G + +W+      D   L   LL  E + I  G I+ +  +    +R+++A
Sbjct:  242 IITYSERHNIPIIEDDIFRDIFFSDPTP-AIKTYDKLGKVIHISSFSKTIAPAIRIGWIVASEKIIEQLADVRMQIDYGSSILSQMVVYEMLKNKSYDKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLSKEKILINPGYIYGSKEK---SIRLSFA 421          
BLAST of EY720031 vs. ExPASy Swiss-Prot
Match: NORG_STAAM (HTH-type transcriptional regulator norG OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=norG PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 56/184 (30.43%), Postives = 103/184 (55.98%), Query Frame = 2
Query:    5 LLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVVLCSSFSKTLAPGLRIGW-VAPGRYLERVLHMKYISTGATATQPQIAIAEFLKNGHFEPHLRRMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSFMLWVELPEGFDTLKL-NRLLVDEGVQIAVGSIFSASXQYRXLLRMNYA 550
            ++T ++R ++ IIEDD++ ++ +S P P  IK++D+ G+V+  SSFSKT+AP +RIGW VA  + +E++  ++      ++   Q+ + E LKN  ++ HL ++R   +  RD ML+ ++  F        P G + +W+      D   L   LL  E + I  G I+ +  +    +R+++A
Sbjct:  242 IITYSERHNIPIIEDDIFRDIFFSDPTP-AIKTYDKLGKVIHISSFSKTIAPAIRIGWIVASEKIIEQLADVRMQIDYGSSILSQMVVYEMLKNKSYDKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLSKEKILINPGYIYGSKEK---SIRLSFA 421          
The following BLAST results are available for this feature:
BLAST of EY720031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
YJIR_ECOLI2.968e-5455.74Uncharacterized HTH-type transcriptional regulator... [more]
YDCR_ECOLI1.483e-2934.62Uncharacterized HTH-type transcriptional regulator... [more]
Y104_SULSO9.951e-2634.97Uncharacterized aminotransferase SSO0104 OS=Sulfol... [more]
YDFD_BACSU1.259e-2030.60Uncharacterized HTH-type transcriptional regulator... [more]
YISV_BACSU2.147e-2030.05Uncharacterized HTH-type transcriptional regulator... [more]
NORG_STAAC1.539e-1830.43HTH-type transcriptional regulator norG OS=Staphyl... [more]
NORG_STAA81.539e-1830.43HTH-type transcriptional regulator norG OS=Staphyl... [more]
NORG_STAA31.539e-1830.43HTH-type transcriptional regulator norG OS=Staphyl... [more]
NORG_STAAN2.010e-1830.43HTH-type transcriptional regulator norG OS=Staphyl... [more]
NORG_STAAM2.010e-1830.43HTH-type transcriptional regulator norG OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-B04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720031 ID=EY720031; Name=EY720031; organism=Citrus sinensis; type=EST; length=732bp
CGCGCTGCTGACCCTGGCCCAGCGCTTCGACGTGGCAATCATCGAAGACG
ATGTGTATGGCGAACTGGCCTACAGCTACCCGCGTCCACGCACTATCAAG
TCCTTCGACGAAGATGGCCGCGTCGTACTGTGCAGTTCCTTCTCGAAAAC
CCTGGCGCCCGGCCTGCGGATTGGCTGGGTAGCACCCGGTCGTTACCTCG
AGCGCGTCCTGCACATGAAATACATCAGCACCGGCGCCACCGCGACCCAG
CCGCAGATCGCGATTGCCGAGTTTCTGAAAAATGGCCATTTCGAACCGCA
TTTGCGGCGGATGCGTACGCAATACCAGCGTAATCGCGACCTGATGCTCG
ATTGGGTCAGCCGCTATTTCCCGGCCGGCACCCGCGCCAGTCGTCCACAG
GGCAGTTTCATGCTGTGGGTGGAGCTGCCGGAAGGCTTCGACACCCTGAA
GCTCAACCGGCTGCTAGTGGATGAAGGTGTACAGATTGCCGTGGGAAGTA
TCTTTTCCGCCTCCNNGCAGTACCGGAANTTGTTGCGCATGAACTACGCT
NGCAAACGACGCCGCAAATTGAAGAGGCGTGCGCAAGGGTCGCGCAACCG
CCATCANGTTGCTGGCCGAAAGCGTGGACTGACCTTTTGCGGNAAATAGC
GTATATGCCGACATCGCCCTGACTCGAACCNATGTCATGATGACCCACGG
CTATTACGNTTTTCTGCTGGNCATCTGNCCTG
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