EY720023

Overview
NameEY720023
Unique NameEY720023
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11145 contig Csv1_Contig11145:1..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720023 vs. ExPASy Swiss-Prot
Match: AP2B1_BOVIN (AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 1.120e-41
Identity = 90/252 (35.71%), Postives = 158/252 (62.70%), Query Frame = 1
Query:   40 RLQHANGAVVLATIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEREPSAEXRLHLLXAVMKCFFRR 783
            RL HAN AVVL+ +KV   FL L    +D +  + +++  PL+TL+S G PE  Y  L +++++V + P I   + K F+ +YN+P YVK  KL+++  +A+++N  +++ EL EYA  VD+   R+++RA+G+ A++ +      V  LL  ++ + +YV  EA+V+++D+ RKYP      IA +   +  ++ EP A+AA+IW++GEY++ + +A  +LES  E +  E S + +L LL A++K F ++
Sbjct:  247 RLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTLLS-GEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCE-NLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDE-STQVQLTLLTAIVKLFLKK 495          
BLAST of EY720023 vs. ExPASy Swiss-Prot
Match: AP1B1_BOVIN (AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.120e-41
Identity = 90/252 (35.71%), Postives = 158/252 (62.70%), Query Frame = 1
Query:   40 RLQHANGAVVLATIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEREPSAEXRLHLLXAVMKCFFRR 783
            RL HAN AVVL+ +KV   FL L    +D +  + +++  PL+TL+S G PE  Y  L +++++V + P I   + K F+ +YN+P YVK  KL+++  +A+++N  +++ EL EYA  VD+   R+++RA+G+ A++ +      V  LL  ++ + +YV  EA+V+++D+ RKYP      IA +   +  ++ EP A+AA+IW++GEY++ + +A  +LES  E +  E S + +L LL A++K F ++
Sbjct:  247 RLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTLLS-GEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCE-NLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDE-STQVQLTLLTAIVKLFLKK 495          
BLAST of EY720023 vs. ExPASy Swiss-Prot
Match: AP2B1_RAT (AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.463e-41
Identity = 90/252 (35.71%), Postives = 158/252 (62.70%), Query Frame = 1
Query:   40 RLQHANGAVVLATIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEREPSAEXRLHLLXAVMKCFFRR 783
            RL HAN AVVL+ +KV   FL L    +D +  + +++  PL+TL+S G PE  Y  L +++++V + P I   + K F+ +YN+P YVK  KL+++  +A+++N  +++ EL EYA  VD+   R+++RA+G+ A++ +      V  LL  ++ + +YV  EA+V+++D+ RKYP      IA +   +  ++ EP A+AA+IW++GEY++ + +A  +LES  E +  E S + +L LL A++K F ++
Sbjct:  247 RLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLS-GEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCE-NLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDE-STQVQLTLLTAIVKLFLKK 495          
BLAST of EY720023 vs. ExPASy Swiss-Prot
Match: AP2B1_MOUSE (AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.463e-41
Identity = 90/252 (35.71%), Postives = 158/252 (62.70%), Query Frame = 1
Query:   40 RLQHANGAVVLATIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEREPSAEXRLHLLXAVMKCFFRR 783
            RL HAN AVVL+ +KV   FL L    +D +  + +++  PL+TL+S G PE  Y  L +++++V + P I   + K F+ +YN+P YVK  KL+++  +A+++N  +++ EL EYA  VD+   R+++RA+G+ A++ +      V  LL  ++ + +YV  EA+V+++D+ RKYP      IA +   +  ++ EP A+AA+IW++GEY++ + +A  +LES  E +  E S + +L LL A++K F ++
Sbjct:  247 RLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLS-GEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCE-NLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDE-STQVQLTLLTAIVKLFLKK 495          
BLAST of EY720023 vs. ExPASy Swiss-Prot
Match: AP2B1_HUMAN (AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.463e-41
Identity = 90/252 (35.71%), Postives = 158/252 (62.70%), Query Frame = 1
Query:   40 RLQHANGAVVLATIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEREPSAEXRLHLLXAVMKCFFRR 783
            RL HAN AVVL+ +KV   FL L    +D +  + +++  PL+TL+S G PE  Y  L +++++V + P I   + K F+ +YN+P YVK  KL+++  +A+++N  +++ EL EYA  VD+   R+++RA+G+ A++ +      V  LL  ++ + +YV  EA+V+++D+ RKYP      IA +   +  ++ EP A+AA+IW++GEY++ + +A  +LES  E +  E S + +L LL A++K F ++
Sbjct:  247 RLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLS-GEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCE-NLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDE-STQVQLTLLTAIVKLFLKK 495          
BLAST of EY720023 vs. ExPASy Swiss-Prot
Match: AP1B1_MOUSE (AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.262e-41
Identity = 88/252 (34.92%), Postives = 158/252 (62.70%), Query Frame = 1
Query:   40 RLQHANGAVVLATIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEREPSAEXRLHLLXAVMKCFFRR 783
            RL HAN AVVL+ +KV   F+ +     D +  + +++  PL+TL+S+  PE  Y  L +++++V + P I   + K F+ +YN+P YVK  KL+++  +A+++N  +++ EL EYA  VD+   R+++RA+G+ A++ +      V  LL  ++ + +YV  EA+V++KD+ RKYP      IA +   +  ++ EP+A+AA+IW++GEY++ + +A  +LES  E +  E S + +L LL A++K F ++
Sbjct:  247 RLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTLLSA-EPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCE-NLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDE-STQVQLQLLTAIVKLFLKK 495          
BLAST of EY720023 vs. ExPASy Swiss-Prot
Match: AP1B1_HUMAN (AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.484e-41
Identity = 88/252 (34.92%), Postives = 158/252 (62.70%), Query Frame = 1
Query:   40 RLQHANGAVVLATIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEREPSAEXRLHLLXAVMKCFFRR 783
            RL HAN AVVL+ +KV   F+ +     D +  + +++  PL+TL+S+  PE  Y  L +++++V + P I   + K F+ +YN+P YVK  KL+++  +A+++N  +++ EL EYA  VD+   R+++RA+G+ A++ +      V  LL  ++ + +YV  EA+V++KD+ RKYP      IA +   +  ++ EP+A+AA+IW++GEY++ + +A  +LES  E +  E S + +L LL A++K F ++
Sbjct:  247 RLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSA-EPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCE-NLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDE-STQVQLQLLTAIVKLFLKK 495          
BLAST of EY720023 vs. ExPASy Swiss-Prot
Match: AP1B1_RAT (AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.113e-40
Identity = 87/252 (34.52%), Postives = 158/252 (62.70%), Query Frame = 1
Query:   40 RLQHANGAVVLATIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEREPSAEXRLHLLXAVMKCFFRR 783
            RL HAN AVVL+ +KV   F+ +     D +  + +++  PL+TL+S+  PE  Y  L +++++V + P I   + K F+ +YN+P YVK  KL+++  +A+++N  +++ EL EYA  VD+   R+++RA+G+ A++ +      V  LL  ++ + +YV  EA+V++KD+ RKYP      IA +   +  ++ EP+A+AA+IW++GEY++ + +A  +LES  + +  E S + +L LL A++K F ++
Sbjct:  247 RLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTLLSA-EPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCE-NLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLDGFHDE-STQVQLQLLTAIVKLFLKK 495          
BLAST of EY720023 vs. ExPASy Swiss-Prot
Match: AP1B_DICDI (AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.707e-40
Identity = 88/251 (35.06%), Postives = 158/251 (62.95%), Query Frame = 1
Query:   40 RLQHANGAVVLATIKVFLHLTLSM--TDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEREPSAEXRLHLLXAVMKCFFRR 783
            RLQHAN AVVL+ +KV +    S+   DV +   +++  PL+TL+S   PE  +  L +++++V + P I   + K F+C+YN+P YVK  KLE++  +ANE N  E++ E  EYA  +D+   R+++RA+G+ A++        +  LL  ++ + +YV  EA++++KD+ RKYP      IA +   + +++ EP+AKA++IW++GEY++ + +A  +L S  E ++ E +++ +L LL +++K F +R
Sbjct:  246 RLQHANSAVVLSAVKVLMKYMNSIGNNDVIRLFCKKMAPPLVTLLSK-EPEIQFLGLRNINLIVQKRPEILQYEMKVFFCKYNDPIYVKMEKLEIMIMLANEKNIEEVLLEFKEYATEIDVEFVRKAVRAIGRCAIKIDRASERCIQVLLDLIQTKVNYVVQEAIIVIKDIFRKYPNKYEGIIATL-CANLESLDEPEAKASMIWIIGEYAERIDNAHELLNSFLEGFKDE-NSQVQLQLLTSIVKLFLKR 493          
BLAST of EY720023 vs. ExPASy Swiss-Prot
Match: AP2B_SCHPO (AP-2 complex subunit beta OS=Schizosaccharomyces pombe GN=apl1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.029e-40
Identity = 84/250 (33.60%), Postives = 159/250 (63.60%), Query Frame = 1
Query:   43 LQHANGAVVLATIKVFLHLTLSMTDVHQ--QVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEREPSAEXRLHLLXAVMKCFFRR 783
            LQH N AV +  +KV L+LT  M D ++  + + + + PL+TL++  S    Y +L ++ I++ + P +FA+D   FYC +++P YVK  KL++LT +A+  N  +I+ E  EYA+ +D+ + R+S++ +G +A++ +   N  +D L++ +  +  YV  EA+++++D+LRKYP  S+  +  +   +  ++ EP AK+A+IW+LG+Y+++++D+  +L    + +  EP  E +L LL AV+K F ++
Sbjct:  248 LQHGNAAVCMGAVKVILYLTNYMKDDNRVKEYFMKTQPPLVTLLARKSSATQYVILRNIQIILEQCPEMFANDIHFFYCNFDDPIYVKLEKLDILTKIADIHNLDQILPEFVEYASEIDVELVRKSVKCIGYLAIKIEERKNDCIDSLIELMNTKVTYVIQEAVIVIRDILRKYP-GSYKSLVPILYENLDSLDEPDAKSAVIWILGQYAEEIEDSITLLNDYLKGFFDEP-LEIQLTLLTAVIKVFLKK 495          
The following BLAST results are available for this feature:
BLAST of EY720023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
AP2B1_BOVIN1.120e-4135.71AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 P... [more]
AP1B1_BOVIN1.120e-4135.71AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1... [more]
AP2B1_RAT1.463e-4135.71AP-2 complex subunit beta OS=Rattus norvegicus GN=... [more]
AP2B1_MOUSE1.463e-4135.71AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1... [more]
AP2B1_HUMAN1.463e-4135.71AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1... [more]
AP1B1_MOUSE7.262e-4134.92AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1... [more]
AP1B1_HUMAN9.484e-4134.92AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1... [more]
AP1B1_RAT2.113e-4034.52AP-1 complex subunit beta-1 OS=Rattus norvegicus G... [more]
AP1B_DICDI4.707e-4035.06AP-1 complex subunit beta OS=Dictyostelium discoid... [more]
AP2B_SCHPO8.029e-4033.60AP-2 complex subunit beta OS=Schizosaccharomyces p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-A07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720023 ID=EY720023; Name=EY720023; organism=Citrus sinensis; type=EST; length=932bp
CCACGCGTCCGATTTGACATCATGAATCTCCTTGAAGATAGACTTCAACA
TGCAAATGGTGCTGTTGTTTTAGCCACCATCAAAGTTTTTCTTCATTTGA
CCTTATCCATGACCGATGTTCATCAGCAGGTTTACGAACGCATCAAAGCT
CCTTTGCTAACCTTAGTGAGTTCTGGAAGTCCGGAGCAATCTTATGCAGT
TTTAAGCCACCTGCATATTTTGGTGATGCGTGCACCCTTTATATTTGCCT
CAGACTACAAACACTTTTATTGCCAGTATAATGAACCTTCTTATGTCAAG
AAGCTGAAGCTTGAAATGTTGACTGCAGTTGCAAATGAGAGCAATACATA
TGAAATTGTAACGGAATTATGCGAATATGCTGCGAATGTCGATATCCCCA
TTGCAAGAGAGTCTATTAGGGCTGTTGGAAAAATAGCTCTGCAGCAGTAT
GATGTGAATGCTATTGTTGATAGGCTTCTTCAGTTTCTGGAAATGGAAAA
GGACTATGTGACTGCTGAAGCTCTGGTGCTTGTAAAAGATTTACTTAGAA
AATATCCACAGTGGAGTCATGATTGCATTGCAGTTGTTGGGAGTATCAGC
AGCCAAAATGTTCAGGAACCCAAGGCGAAGGCAGCTCTTATATGGATGTT
GGGGGAATATTCTCAGGATATGCAAGATGCTCCTTACATTTTAGAAAGTT
TAACCGAAAATTGGGAAAGAGAGCCTTCAGCAGAGGNTCGTTTACATCTT
CTCANCGCTGTAATGAAGTGTTTTTTCAGAAGGCACCTGAGACTCAAAAA
GTCTTGGGAGCTGCTTTGGCTGCTGGTCTGGCTGATTTTCACCAGGATGT
CATGATAGGCCTTATTCTACATAGGCTTNNTGCATATATGTATCTGTAGC
AAAACGAGTTGTGACCTNTCAAAGCAGCTGNT
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