EY749278

Overview
NameEY749278
Unique NameEY749278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY749278 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.594e-32
Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  170 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRTREILAFF 352
            +L  IISR  FDD+L++RND  CPARGFYTYDAFI AA++FPGFG +G+   R +EI AFF
Sbjct:   70 DLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFF 130          

HSP 2 Score: 72.0182 bits (175), Expect = 3.594e-32
Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 3
Query:  348 FFAQTGHENTGGWPDAPGGEYAWGYCFIPEVSPPSHYCDPN--YPC-RGKS-YGPRHLPLPW 521
            FF QT HE TGGW  AP G Y+WGYCF  E +P S+YC P+  +PC  GKS YG   + L W
Sbjct:  129 FFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSW 190          
BLAST of EY749278 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.762e-31
Identity = 34/57 (59.65%), Postives = 46/57 (80.70%), Query Frame = 2
Query:  179 KIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRTREILAF 349
            KIISR MFD +L++RN+  CPA+GFYTYDAF+ AA++FP FG +G+  +R RE+ AF
Sbjct:    4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAF 60          

HSP 2 Score: 78.1814 bits (191), Expect = 1.762e-31
Identity = 37/62 (59.68%), Postives = 40/62 (64.52%), Query Frame = 3
Query:  348 FFAQTGHENTGGWPDAPGGEYAWGYCFIPEVSPPSHYC--DPNYPCR-GKS-YGPRHLPLPW 521
            F  QT HE TGGWP AP G YAWGYCF+ E +P S+YC   P YPC  GKS YG   L L W
Sbjct:   60 FLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSW 121          
BLAST of EY749278 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 4.163e-30
Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 2
Query:  170 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRTREILAFF 352
            +L  IIS   FDD+L++RND  CPARGFYTY+AFI AA++FPGFG +G+   R +E+ AFF
Sbjct:   85 DLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFF 145          

HSP 2 Score: 70.4774 bits (171), Expect = 4.163e-30
Identity = 31/62 (50.00%), Postives = 38/62 (61.29%), Query Frame = 3
Query:  348 FFAQTGHENTGGWPDAPGGEYAWGYCFIPEVSPPSHYCDPN--YPCRG--KSYGPRHLPLPW 521
            FF QT HE TGGW  AP G Y+WGYCF  E +P S YC+P+  +PC    + YG   + L W
Sbjct:  144 FFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSW 205          
BLAST of EY749278 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.029e-29
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 2
Query:  170 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRTREILAFF 352
            +LG IIS  MFD +L++RND  C  +GFY+Y+AFI AA++FPGFG SG+ T R REI AFF
Sbjct:   79 DLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFF 139          

HSP 2 Score: 67.3958 bits (163), Expect = 2.029e-29
Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 3
Query:  348 FFAQTGHENTGGWPDAPGGEYAWGYCFIPEVSPPSHYCDPN--YPCR-GKSY 494
            FFAQT HE TGGW  AP G YAWGYC++ E   P  YC P+  +PC  G+ Y
Sbjct:  138 FFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKY 189          
BLAST of EY749278 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.030e-29
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 2
Query:  170 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRTREILAFF 352
            +LG IIS  MFD +L++RND  C  +GFY+Y+AFI AA++FPGFG SG+ T R REI AFF
Sbjct:   74 DLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFF 134          

HSP 2 Score: 67.3958 bits (163), Expect = 2.030e-29
Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 3
Query:  348 FFAQTGHENTGGWPDAPGGEYAWGYCFIPEVSPPSHYCDPN--YPCR-GKSY 494
            FFAQT HE TGGW  AP G YAWGYC++ E   P  YC P+  +PC  G+ Y
Sbjct:  133 FFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKY 184          
BLAST of EY749278 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.644e-29
Identity = 36/60 (60.00%), Postives = 50/60 (83.33%), Query Frame = 2
Query:  170 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRTREILAF 349
            ++G++I+R MF+D+L++RN+  CP +GFYTYDAFI AA+AFPGFG +G+ T R REI AF
Sbjct:   64 DIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAF 123          

HSP 2 Score: 65.0846 bits (157), Expect = 2.644e-29
Identity = 28/52 (53.85%), Postives = 33/52 (63.46%), Query Frame = 3
Query:  348 FFAQTGHENTGGWPDAPGGEYAWGYCFIPEVSPPSHYCDPN--YPC-RGKSY 494
            F AQT HE TGGW  AP G YAWGYC++ E   P  YC P+  +PC  G+ Y
Sbjct:  123 FLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKY 174          
BLAST of EY749278 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.438e-29
Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 2
Query:  173 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRTREILAF 349
            L  II +  FD LL++RND RCPA GFYTY+AFI AA+ FP FGN+G++ MR REI AF
Sbjct:   89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAF 147          

HSP 2 Score: 69.3218 bits (168), Expect = 3.438e-29
Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 3
Query:  348 FFAQTGHENTGGWPDAPGGEYAWGYCFIPEVSPPSHYCDP--NYPC-RGKSY-GPRHLPLPW 521
            F  QT HE TGGWPDAP G YAWGYC++ E++    YCDP  NY C  GK Y G   + L W
Sbjct:  147 FLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQCVAGKQYCGRGPIQLSW 207          
BLAST of EY749278 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.180e-28
Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 2
Query:  173 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRTREILAF 349
            +G I+ R++F+ LL +RND  CPARGFYTY+AF+ AA AFP FG +GN   R RE+ AF
Sbjct:   89 VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAF 147          

HSP 2 Score: 69.707 bits (169), Expect = 2.180e-28
Identity = 29/52 (55.77%), Postives = 35/52 (67.31%), Query Frame = 3
Query:  348 FFAQTGHENTGGWPDAPGGEYAWGYCFIPEVSPPSHYCDPN--YPCR-GKSY 494
            F  QT HE TGGWP AP G ++WGYCF  E +PPS YC P+  +PC  G+ Y
Sbjct:  147 FLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKY 198          
BLAST of EY749278 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.842e-28
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 2
Query:  170 ELGKIISREMFDDLLEYRNDERCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRTREILAFF 352
            +LG +IS  MFD +L +RND  C  +G FY+Y+AFI AA +FPGFG +G+ T R REI AFF
Sbjct:   67 DLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFF 128          

HSP 2 Score: 72.4034 bits (176), Expect = 2.842e-28
Identity = 31/52 (59.62%), Postives = 35/52 (67.31%), Query Frame = 3
Query:  348 FFAQTGHENTGGWPDAPGGEYAWGYCFIPEVSPPSHYCDPN--YPCR-GKSY 494
            FFAQT HE TGGWP AP G YAWGYCF+ E   P  YC P+  +PC  G+ Y
Sbjct:  127 FFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKY 178          
BLAST of EY749278 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.062e-27
Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  170 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRTREILAF 349
            +L  +ISR  FD +L++RND  CPA+GFYTYDAFI AA+A+P FGN+G+   R REI AF
Sbjct:   75 DLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAF 134          

HSP 2 Score: 63.5438 bits (153), Expect = 1.062e-27
Identity = 30/62 (48.39%), Postives = 36/62 (58.06%), Query Frame = 3
Query:  348 FFAQTGHENTGGWPDAPGGEYAWGYCFIPEVSPPSHYCD--PNYPCR--GKSYGPRHLPLPW 521
            F  QT HE TGGW  AP G YAWGYCF+ E + PS YC   P +PC    + YG   + + W
Sbjct:  134 FLGQTSHETTGGWATAPDGPYAWGYCFVRERN-PSTYCSATPQFPCAPGQQYYGRGPIQISW 194          
The following BLAST results are available for this feature:
BLAST of EY749278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CHI2_BRANA3.594e-3263.93Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIT_CARPA1.762e-3159.65Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHIB_ARATH4.163e-3059.02Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI1_TOBAC2.029e-2960.66Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHI2_TOBAC2.030e-2960.66Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHIB_VITVI2.644e-2960.00Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHI6_POPTR3.438e-2962.71Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]
CHI2_ORYSJ2.180e-2857.63Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_SOLTU2.842e-2856.45Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHIT_PHAVU1.062e-2760.00Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-072-B01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749278 ID=EY749278; Name=EY749278; organism=Citrus sinensis; type=EST; length=924bp
CACCCCCGCGTCCGTTGATATCATAACTGTTGCTTTCCAAATGAGGCTTA
TTGGGTCCTTACTAATTTTCTCTCTAGTTTTATCTTTTGTACTAGGAGGC
TCACCACAGAACTGTGGAAGCGGCGTTGTGTACGGTGGACGTGATACCGG
CCATGGGACGCATGGCGGTGAACTGGGCAAGATCATCTCAAGGGAGATGT
TTGATGACTTGCTTGAGTATAGAAATGATGAACGATGCCCTGCCAGAGGC
TTCTACACTTATGATGCTTTTATAGAGGCAGCCCAAGCTTTTCCAGGCTT
TGGTAACTCTGGAAATGAAACCATGCGTACAAGAGAAATCCTTGCCTTTT
TTTGCCCAAACTGGACATGAAAATACTGGGGGATGGCCCGATGCCCCTGG
TGGCGAATATGCTTGGGGATATTGCTTTATACCTGAAGTCAGCCCTCCGT
CCCACTACTGTGATCCTAACTATCCATGTCGAGGGAAGTCCTACGGGCCA
CGTCACCTCCCTCTCCCTTGGCTAGCGCCGCACATCTTCACCTGCTATCT
CTCTGTCCCCTCCGGCACGACATACCCCCGCCCCCTCCTCCCCCCCCCCC
CGGACAAGCCGAACTCATATCCGTGGCGACCACCCCTACATACCCTCATA
CTGTGGCGCCTTACCCACTTACATCCCCCCGCACGGCACGGACCACCCAC
CCAGAGCGGCGAACAAGACTACCGCAGCCACCACAGTTCCAACCCTGGCC
GCCACACCGTCGACGTGCCGCTATCTCATGCCTCCCGCGTCGGAGCCGCT
CTGCGCAGCACACGCCCGCGGCCGCCTCACCCGCACCACCCCTCTAGTGG
GGCAATGCAAGGGCCAGGCCGTCCAACCAGTGGACCGCTCGCTCGCCTGA
CACCCACCCACTCTTACTCCTCCA
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