EY749277

Overview
NameEY749277
Unique NameEY749277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: KASM_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.835e-55
Identity = 105/138 (76.09%), Postives = 116/138 (84.06%), Query Frame = 2
Query:   14 EGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 427
            +GPNHAAVTACATGAHSIGDA RMIQFGD+DVMVAGGTESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGF               HAK+RGAKIYAE+ GYGMSGDAHHITQP  DGKGA+LAMTRAL+Q
Sbjct:  199 QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQ 336          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FABF_RHIME (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti GN=fabF PE=3 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 1.059e-39
Identity = 80/141 (56.74%), Postives = 99/141 (70.21%), Query Frame = 2
Query:    5 HASEGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 427
            H   GPNH+ VTAC+TGAH+IGDA+R+I  GD+DVMVAGGTES I  +S+AGF   +AL+T++N  P++ASRP+D  RDGF               HA+ RGAKIYAEV GYG+SGDA HIT P  DG+GA   M  ALK+
Sbjct:  157 HKLRGPNHSVVTACSTGAHAIGDASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDNPEKASRPYDADRDGFVMGEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSEDGEGAYRCMQMALKR 297          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FABF_VIBHA (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 1.135e-33
Identity = 76/144 (52.78%), Postives = 94/144 (65.28%), Query Frame = 2
Query:   17 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 448
            GPN A  TAC TG H+IG AARMI +GD++ MVAGG E +   L MAGF  ++AL+T+ N  PQ+ASRP+D GRDGF               HAK RGAKIYAE+ G+GMSGDA+H+T P  DG G  LAM  A++    N+ G
Sbjct:  155 GPNIAISTACTTGLHNIGHAARMIAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKGRDGFVLGDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDA--NITG 295          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: OXSM_BOVIN (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos taurus GN=OXSM PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.482e-33
Identity = 72/140 (51.43%), Postives = 91/140 (65.00%), Query Frame = 2
Query:    5 HASEGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            H  +GPNHA  TAC TGAH++GD+ R +  GD+DVMVAGGT+S I  LS+AGF ++RAL+T  N  P+ A RPF   RDGF               HA +RGA++YAE+ GYG+SGDA HIT P   G+GA   M  A+K
Sbjct:  197 HKLKGPNHAVSTACTTGAHAVGDSFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALST--NTDPKSACRPFHPQRDGFVMGEGAAVLVLEEHRHALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAAAVK 334          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FABF_VIBCH (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae GN=fabF PE=3 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.482e-33
Identity = 75/136 (55.15%), Postives = 90/136 (66.18%), Query Frame = 2
Query:   17 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            GPN A  TAC TG H+IG AARMI +GD+D MVAGG E +   L MAGF  ++AL+T+ N  PQ+ASRP+D  RDGF               HAK RGAKIYAEV G+GMSGDA+H+T P  DG G  LAM  A++
Sbjct:  155 GPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGFVLGDGAGIMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMR 289          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: OXSM_SCHPO (Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC887.13c PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.528e-33
Identity = 68/135 (50.37%), Postives = 90/135 (66.67%), Query Frame = 2
Query:   23 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 427
            NH   TACA G H+IGDA   I+ G +DV++AGG+ES I+ L++AGF K+R+L+TK+N  P+ ASRPFD  RDGF               HAK R A IYAE+ GYG++ D++HIT P+ +G  A  AM R+LKQ
Sbjct:  163 NHTTTTACAAGCHAIGDAFNFIKLGHADVIIAGGSESCINPLTVAGFSKARSLSTKFNDNPKAASRPFDANRDGFVIGEGSAALVLEELEHAKNRNAHIYAEIVGYGLASDSYHITAPNPNGDAAYYAMKRSLKQ 297          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: OXSM_HUMAN (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo sapiens GN=OXSM PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.311e-33
Identity = 74/137 (54.01%), Postives = 91/137 (66.42%), Query Frame = 2
Query:   14 EGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            +GPNHA  TAC TGAH++GD+ R I  GD+DVMVAGGT+S I  LS+AGF ++RAL+T  N  P+ A RPF   RDGF               HA +R A+IYAEV GYG+SGDA HIT P  +G+GA+  M  ALK
Sbjct:  199 KGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALST--NSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALK 333          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: OXSM_MOUSE (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus musculus GN=Oxsm PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.638e-32
Identity = 71/137 (51.82%), Postives = 92/137 (67.15%), Query Frame = 2
Query:   14 EGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            +GPNH+  TAC TGAH++GD+ R I  GD+DVMVAGGT+S I  LS+AGF ++RAL++  N  P+ A RPF   RDGF               HA +RGA+IYAE+ GYG+SGDA HIT P  +G+GA+  M  A+K
Sbjct:  199 KGPNHSVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSS--NPDPKLACRPFHPERDGFVMGEGAAVLVLEEHEHAVQRGARIYAEILGYGLSGDAGHITAPDPEGEGALRCMAAAVK 333          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FABF_SHIFL (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri GN=fabF PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.811e-31
Identity = 71/136 (52.21%), Postives = 90/136 (66.18%), Query Frame = 2
Query:   17 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            GP+ +  TAC +G H+IG AAR+I +GD+DVMVAGG E +   L + GF  +RAL+T+ N  PQ ASRP+D  RDGF               HAKKRGAKIYAE+ G+GMS DA+H+T P  +G GA LAM  AL+
Sbjct:  155 GPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALR 289          
BLAST of EY749277 vs. ExPASy Swiss-Prot
Match: FABF_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli (strain K12) GN=fabF PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.811e-31
Identity = 71/136 (52.21%), Postives = 90/136 (66.18%), Query Frame = 2
Query:   17 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 424
            GP+ +  TAC +G H+IG AAR+I +GD+DVMVAGG E +   L + GF  +RAL+T+ N  PQ ASRP+D  RDGF               HAKKRGAKIYAE+ G+GMS DA+H+T P  +G GA LAM  AL+
Sbjct:  155 GPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALR 289          
The following BLAST results are available for this feature:
BLAST of EY749277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
KASM_ARATH6.835e-5576.093-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
FABF_RHIME1.059e-3956.743-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhi... [more]
FABF_VIBHA1.135e-3352.783-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vib... [more]
OXSM_BOVIN1.482e-3351.433-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
FABF_VIBCH1.482e-3355.153-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vib... [more]
OXSM_SCHPO2.528e-3350.37Putative 3-oxoacyl-[acyl-carrier-protein] synthase... [more]
OXSM_HUMAN4.311e-3354.013-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
OXSM_MOUSE1.638e-3251.823-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
FABF_SHIFL1.811e-3152.213-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shi... [more]
FABF_ECOLI1.811e-3152.213-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-072-A09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749277 ID=EY749277; Name=EY749277; organism=Citrus sinensis; type=EST; length=939bp
CACCCACGCGTCCGAGGGACCAAACCATGCTGCTGTAACTGCCTGTGCTA
CCGGCGCACATTCTATCGGTGATGCTGCAAGAATGATTCAGTTTGGTGAT
TCAGATGTCATGGTGGCTGGGGGCACTGAGTCCAGTATCGATGCTTTATC
TATGGCAGGATTTTGCAAGTCGAGAGCTTTGACTACAAAGTACAATGGCA
CCCCACAAGAAGCTTCGCGACCTTTTGATTGTGGCCGGGATGGGTTTGTA
ATAGGTGAAGGTTCTGGTGTCTTGGTATTAGAGGAACTTGAGCATGCTAA
AAAACGAGGAGCCAAAATATATGCTGAGGTTCGTGGCTATGGGATGTCAG
GTGATGCACATCACATAACCCAACCACATATTGATGGAAAAGGTGCCATT
TTGGCCATGACACGTGCCTTAAAACAGGTAGTACACAATGTTGATGGCTT
TGAACAGTTGTCCATCCAATAGTAGTTGTTAGCAGCTGAACTAAATTACC
TATGAAGACTTCAGCATTGGATGTAGTTGTATTAGCACTTTGATCAATTA
TAGCCCAGGGTTTGGGCGGGCAGCATTTATCTTGGGGTTTAGACAACCAT
TCAATGGTTTTTTGACTTCTTAGTGATGCCTCCCCCGGGGCTTCAACAAG
AACTAATAATTAAGAGCTTCAAGAATTATTGGGGGTTCTTACTTTCTATT
TGATTACTGGTGGCTTAACTGGAATTTAATTGGGAGTACCTTTTTAATCA
AAAAAACCCTTGTTGCTTTCTTTTACTGGGGCGTTTAACAAAACGTTTTT
TTTGCTGGCCCCGCCCTTGGCCCCCCATAAACCTCCCTTTGGGGGGGAAA
AAAAATGGGTTTTCCCCTTTTCTTTTTTTTTTATACCCCCTTATGCGGGG
GGGTGCCCCAAAAAAACAAATTTTTCTTTCTTTTTGGTG
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