EY749272

Overview
NameEY749272
Unique NameEY749272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY749272 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 3.422e-63
Identity = 140/198 (70.71%), Postives = 146/198 (73.74%), Query Frame = 3
Query:   45 MTRIKEFFTKLSESSTNQNISNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETL**VTQSRRGS*GVPEQKNLLSQHAGWILKNP*MRAAKTNSGGTGLDGGS 638
            MTRIKEFFTKLSESSTNQNISNIP                           NSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETL  + ++       P +K+ LSQHA  +     M AA TN  GT LDG S
Sbjct:    1 MTRIKEFFTKLSESSTNQNISNIPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKS-LSQHADDL--KTLMSAAMTNQ-GTCLDGFS 194          
BLAST of EY749272 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.784e-62
Identity = 138/198 (69.70%), Postives = 145/198 (73.23%), Query Frame = 3
Query:   45 MTRIKEFFTKLSESSTNQNISNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETL**VTQSRRGS*GVPEQKNLLSQHAGWILKNP*MRAAKTNSGGTGLDGGS 638
            MT IKEFFTKLSESS+NQNISNIP                           NSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETL  + ++       P +K+ LSQHA  +     M AA TN  GT LDG S
Sbjct:    1 MTHIKEFFTKLSESSSNQNISNIPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKS-LSQHADDL--KTLMSAAMTNQ-GTCLDGFS 194          
BLAST of EY749272 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.003e-29
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 3
Query:  207 KNSGDNGN-----EPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLK-RTNLTKREKVALHDCLETIDETL 491
            KNS D+ +        HAI+KS+CS+T +P+LC+SAI  V + SKKVTSQKDVIE+SLNIT  AV  NY+ +++L+K R  LT REKVALHDCLET+DETL
Sbjct:   47 KNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETL 147          

HSP 2 Score: 35.039 bits (79), Expect = 1.003e-29
Identity = 16/25 (64.00%), Postives = 17/25 (68.00%), Query Frame = 1
Query:  493 DELHKAVEDLEEYPNKKIFYHSMRD 567
            DELH AVEDLE YPNKK     + D
Sbjct:  148 DELHTAVEDLELYPNKKSLKEHVED 172          
BLAST of EY749272 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 2.169e-25
Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 3
Query:  240 HAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLL-KRTNLTKREKVALHDCLETIDETL**VTQSRRGS*GVPEQKNLLSQHAGWILKNP*MRAAKTNSGGTGLDGGS 638
            HAILKS CSST YP+LCFSA+AA     K++TSQK+VIE SLN+TT AV+HNYF ++KL+ KR  LT RE  ALHDCLETIDETL  +  +       P+QK+ L +HA  +     + +A TN  GT LDG S
Sbjct:   59 HAILKSVCSSTLYPELCFSAVAAT--GGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKS-LRKHADDL--KTLISSAITNQ-GTCLDGFS 186          
BLAST of EY749272 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.699e-25
Identity = 66/123 (53.66%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  201 SRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLL-KRTNLTKREKVALHDCLETIDETL**VTQSRRGS*GVPEQKNLLSQHAG 566
            S+ N     +   HA+L+SSCSSTRYP+LC SA+  V     ++TSQKDVIE S+N+T TAVEHNYF ++KL+ KR  LT REK ALHDCLETIDETL  + ++       P +K  L +HAG
Sbjct:   43 SKANEKRTLSPSSHAVLRSSCSSTRYPELCISAV--VTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKT-LREHAG 162          
The following BLAST results are available for this feature:
BLAST of EY749272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PME3_CITSI3.422e-6370.71Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI3.784e-6269.70Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC1.003e-2960.40Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME2_ARATH2.169e-2555.22Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_ARATH3.699e-2553.66Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-072-A04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY749272 ID=EY749272; Name=EY749272; organism=Citrus sinensis; type=EST; length=1007bp
CCACGCGTCCGCTTATCTTTTGTTCTCTCTTATCGAGAAAAAAAATGACC
CGCATAAAAGAATTCTTCACAAAACTTTCTGAATCTTCTACCAACCAAAA
CATTTCCAATATTCCCAAGAAAAAAAAGAAACTATTCTTAGCTCTTTTTG
CAACGCTACTCGTTGTCGCTGCCGTAATCGGCATTGTCGCCGGAGTGAAC
TCAAGAAAAAACTCCGGCGACAACGGCAACGAGCCTCATCATGCTATCCT
CAAATCATCATGTAGCAGCACAAGGTACCCGGACTTATGCTTTTCGGCTA
TTGCTGCCGTTCCAGAGGCCTCCAAAAAGGTGACAAGCCAAAAGGACGTT
ATTGAGATGTCCTTAAACATCACAACAACAGCCGTGGAACACAACTACTT
CGGGATTCAGAAGCTCTTGAAGAGAACGAATCTCACCAAACGGGAAAAGG
TTGCTCTCCATGACTGTCTTGAGACGATCGATGAGACTCTTTGATGAGTT
ACACAAAGCCGTCGAGGATCTTGAGGAGTACCCGAACAAAAAAATCTTTT
ATCACAGCATGCGGGATGGATTCTCAAAAACCCCTAAATGAGGGCCGCGA
AGACAAATTCAGGGGGAACGGGCCTTGATGGGGGTTCTCCCATGAAGAAT
GCCTAATAAAGCCCGGGCCGGGGAGGCCTTGGCCAAACGGCCCAGGTTCA
TGGGTTGAAAAAAAGGGGGAAGCAATGGCGCTTGGGTATGATCCAAGAAA
AATGGACCGGGACCCTGGACCTGGAGGATCCGTGGAGGACCTTCAAAACA
CCAAGGAAGACTGGGAAAAAGGGAAAACACAAATAACCGGGGGGAAGGGG
GGGGGGGGCCGGGGGGGGGGGGGTGGTCTCCCCCCCCGGAGAAAAACAGG
AAACGGGGTGGTGTTGCAAATACCTCCCCCCGCCGCCGGAGAGGGGGAAA
AACGCCAAAAAACAGGGGGGGGGGGGGGGGGGGGGGGAGAACCAACAAAA
AAAGTGG
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