EY695518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY695518 vs. ExPASy Swiss-Prot
Match: FDFT_ARATH (Squalene synthetase OS=Arabidopsis thaliana GN=SQS1 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.617e-66 Identity = 120/168 (71.43%), Postives = 137/168 (81.55%), Query Frame = 3 Query: 333 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGIXMQLXI*PKEWVLGWQNHL-QRGRSIDDYDEY 833 MGSL +LR+PDD+YPLLK+K A +AEKQIPPEPHW FCYSMLHKVSRSF+LVIQQL T+LRNAVC+FYLVLRALDTVEDDTSIPTD KVPILIAFHRH+YD +WH+SCGTKEYK+LMDQFHHVS AFLEL KG + + G + Q ++DDYDEY Sbjct: 1 MGSLGTMLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLNTELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFHRHIYDTDWHYSCGTKEYKILMDQFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQEVETVDDYDEY 168
BLAST of EY695518 vs. ExPASy Swiss-Prot
Match: FDFT_NICBE (Squalene synthetase OS=Nicotiana benthamiana PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.049e-65 Identity = 122/168 (72.62%), Postives = 138/168 (82.14%), Query Frame = 3 Query: 333 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGIXMQLXI*PKEWVLGWQNHL-QRGRSIDDYDEY 833 MGSL A+L++P+DLYPL+KLK+A+R AEKQIPP P+W FCYSMLHKVSRSFALVIQQL +LR+AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLEL K + G + + + DDYDEY Sbjct: 1 MGSLRAILKNPEDLYPLVKLKLAARHAEKQIPPSPNWGFCYSMLHKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEY 168
BLAST of EY695518 vs. ExPASy Swiss-Prot
Match: FDFT_RAT (Squalene synthetase OS=Rattus norvegicus GN=Fdft1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.731e-23 Identity = 54/133 (40.60%), Postives = 82/133 (61.65%), Query Frame = 3 Query: 354 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGK 734 L HP++ Y LL+ +M R+ IP + CY L + SRSFA VIQ L D+R+AVC+FYL+LRA+DTVEDD +I + K+P+L FH +Y+ EW F+ ++++V+++ F +S F L + Sbjct: 7 LGHPEEFYNLLRFRMGGRR--NFIPKMDRNSLSNSLKTCYKYLDQTSRSFAAVIQALDGDIRHAVCVFYLILRAMDTVEDDMAISVEKKIPLLRNFHTFLYEPEWRFTESKEKHRVVLEDFPTISLEFRNLAE 137 HSP 2 Score: 25.0238 bits (53), Expect = 1.731e-23 Identity = 12/29 (41.38%), Postives = 15/29 (51.72%), Query Frame = 2 Query: 716 FSGAWKRYXDAIXDITKRMGAGMAKSFAK 802 F ++Y I DI RMG GMA+ K Sbjct: 132 FRNLAEKYQTVIADICHRMGCGMAEFLNK 160
BLAST of EY695518 vs. ExPASy Swiss-Prot
Match: FDFT_MOUSE (Squalene synthetase OS=Mus musculus GN=Fdft1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.931e-23 Identity = 55/131 (41.98%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 354 LRHPDDLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGK 734 L HP++ Y LL+ +M R+ Q CY L++ SRSFA VIQ L D+R+A+C+FYLVLRALDTVEDD SI + K+P+L FH +YD EW F+ ++ + +++ F +S F L + Sbjct: 7 LGHPEEFYNLLRFRMGGRRNFIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIRHAICVFYLVLRALDTVEDDMSISVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFPTISLEFRNLAE 137 HSP 2 Score: 23.0978 bits (48), Expect = 2.931e-23 Identity = 10/25 (40.00%), Postives = 14/25 (56.00%), Query Frame = 2 Query: 716 FSGAWKRYXDAIXDITKRMGAGMAK 790 F ++Y I DI +MG GMA+ Sbjct: 132 FRNLAEKYQTVIDDICHQMGCGMAE 156
BLAST of EY695518 vs. ExPASy Swiss-Prot
Match: FDFT_BOVIN (Squalene synthetase OS=Bos taurus GN=FDFT1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.402e-23 Identity = 55/133 (41.35%), Postives = 83/133 (62.41%), Query Frame = 3 Query: 354 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGK 734 L HP++ Y LL+ +M R+ K IP + CY L++ SRSFA VIQ L ++R+AVCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W F+ ++ + +++ F +S F L + Sbjct: 7 LGHPEEFYNLLRFQMGGRR--KVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLEDFPTISLEFRNLAE 137 HSP 2 Score: 25.7942 bits (55), Expect = 8.402e-23 Identity = 17/47 (36.17%), Postives = 25/47 (53.19%), Query Frame = 2 Query: 716 FSGAWKRYXDAIXDITKRMGAGMAKSFAKR*I-DR*L**IXYYVAGL 853 F ++Y I D+ ++MG GMA+ KR +R +YVAGL Sbjct: 132 FRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGL 178
BLAST of EY695518 vs. ExPASy Swiss-Prot
Match: FDFT_PONAB (Squalene synthetase OS=Pongo abelii GN=FDFT1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.976e-21 Identity = 52/133 (39.10%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 354 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGK 734 L HP++ Y L++ ++ ++ K +P + CY L++ SRSFA VIQ L ++RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++ F +S F L + Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAE 137 HSP 2 Score: 25.7942 bits (55), Expect = 1.976e-21 Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 2 Query: 716 FSGAWKRYXDAIXDITKRMGAGMAKSFAK 802 F ++Y I DI +RMG GMA+ K Sbjct: 132 FRNLAEKYQTVIADICRRMGIGMAEFLDK 160
BLAST of EY695518 vs. ExPASy Swiss-Prot
Match: FDFT_HUMAN (Squalene synthetase OS=Homo sapiens GN=FDFT1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.976e-21 Identity = 52/133 (39.10%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 354 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGK 734 L HP++ Y L++ ++ ++ K +P + CY L++ SRSFA VIQ L ++RNAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++ F +S F L + Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAE 137 HSP 2 Score: 25.7942 bits (55), Expect = 1.976e-21 Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 2 Query: 716 FSGAWKRYXDAIXDITKRMGAGMAKSFAK 802 F ++Y I DI +RMG GMA+ K Sbjct: 132 FRNLAEKYQTVIADICRRMGIGMAEFLDK 160
BLAST of EY695518 vs. ExPASy Swiss-Prot
Match: FDFT_PICJA (Squalene synthetase OS=Pichia jadinii GN=ERG9 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.483e-19 Identity = 57/178 (32.02%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 333 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS---------CGTKEYKVLMDQFHHVSTAFLELGKGIXMQLXI*PKEWVLGWQNHLQRGRSIDDYDEY 833 MG L + HPD+L +++ K+ + + P CY +L+ SRSFA VI++L +LRN + +FYLVLRALDTVE D SI VK+P+L FH + ++W F C E+ ++ Q+H + + ++ K I ++ +++ + +I+DYD Y Sbjct: 1 MGKLLQLALHPDELASIVQFKLFRKNENARNPATESAELIRCYELLNLTSRSFAAVIEELHPELRNVIMVFYLVLRALDTVEVDMSIENSVKLPVLRQFHEKLDTKDWTFDGNSPNEKDRCVLVEFDRILGQYHELKPQYQKVIKEITEKMGNGMADYIENENFNSNGLLTIEDYDLY 178
BLAST of EY695518 vs. ExPASy Swiss-Prot
Match: FDFT_YEAST (Squalene synthetase OS=Saccharomyces cerevisiae GN=ERG9 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 5.634e-19 Identity = 60/178 (33.71%), Postives = 92/178 (51.69%), Query Frame = 3 Query: 333 MGSLAAVLRHPDDLYPLLKLKMASRQAEK--QIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYK---VLMD------QFHHVSTAFLELGKGIXMQLXI*PKEWVLGWQNHLQRGRSIDDYDEY 833 MG L + HP ++ LKLK P+ C+ +L+ SRSFA VI++L +LRN V +FYL+LRALDT+EDD SI D+K+ +L FH + +W F + K VL D +FH + + E+ K I ++ +++L +L +++ DYD Y Sbjct: 1 MGKLLQLALHPVEMKAALKLKFCRTPLFSIYDQSTSPYLLHCFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIKEITEKMGNGMADYILDENYNLNGLQTVHDYDVY 178
BLAST of EY695518 vs. ExPASy Swiss-Prot
Match: FDFT_DICDI (Squalene synthetase OS=Dictyostelium discoideum GN=fdfT PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.255e-18 Identity = 64/185 (34.59%), Postives = 96/185 (51.89%), Query Frame = 3 Query: 354 LRHPDDLYPLLKLKMASRQAEKQIPPEP--HWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH-FSCG-TKEYKVLMDQFHHVSTAFLELGKGIXMQLXI*PKEWVLGWQNHLQRG-RSIDDYDEYXTM*QDLXDXSV-QAFYASG 890 L HPD+ LLK+ K E + +CY +L+K SRSFA VI +L L++A+CIFYLVLR LDT+EDDT++ + K+P+L +F +Y + F G + K L++ F V FL LG G + + G LQ+ ++ ++D Y L + + F+ASG Sbjct: 7 LAHPDEFLSLLKIGYTESFKPKSQLKENLGNKEWCYELLNKTSRSFAFVINELEPSLKDAICIFYLVLRGLDTIEDDTTVELNTKLPVLTSFSEGLYQPGYKVFGYGMNNDEKNLVENFDKVVDVFLGLGDGYCTIIHDITRRMANGMSEFLQKSVVTLPEWDLYCHYVAGLVGIGLSKIFHASG 191 The following BLAST results are available for this feature:
BLAST of EY695518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY695518 ID=EY695518; Name=EY695518; organism=Citrus sinensis; type=EST; length=894bpback to top |