EY695517

Overview
NameEY695517
Unique NameEY695517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10917 contig Csv1_Contig10917:23..924. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY695517 vs. ExPASy Swiss-Prot
Match: UFD1_DICDI (Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum GN=ufd1 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 7.474e-59
Identity = 105/183 (57.38%), Postives = 140/183 (76.50%), Query Frame = 1
Query:  145 FEQSYRCYPASFI--EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYXEP*KP 687
            +EQ ++ +P SF+  EK  +ESG KI++PPSAL+ L+ L+I YPMLFE+ N  + + SHCGVLEFIAEEG+ Y+P WMM+NL L+EG+ + +KN TL KGT+VK+QP T +F+DISNPKA+LE +LR ++ LT  D IM+ YNN KYY+ ++E KP+NAISIIE D  VDFAPP+D  E   P
Sbjct:   25 YEQKFKAFPISFLPKEKHSLESGGKILLPPSALNALSRLNIQYPMLFEISNPISGKKSHCGVLEFIAEEGICYLPLWMMQNLQLKEGEFIDIKNATLAKGTFVKIQPRTSNFIDISNPKAVLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKPANAISIIEADVSVDFAPPMDSKEATSP 207          
BLAST of EY695517 vs. ExPASy Swiss-Prot
Match: UFD1_RAT (Ubiquitin fusion degradation protein 1 homolog OS=Rattus norvegicus GN=Ufd1l PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.101e-57
Identity = 103/186 (55.38%), Postives = 137/186 (73.66%), Query Frame = 1
Query:  145 FEQSYRCYPASFIEKPQ----IESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYXEP*KPI 690
            F   YRC+  S +  P     +E G KIIMPPSALD+L+ L+I YPMLF+L N  ++R++HCGVLEF+A+EG+ Y+P+WMM+NLLL+EG +V+V++V L   TY K QP + DFLDI+NPKA+LE  LRN++CLTTGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL Y EP +P+
Sbjct:   19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERPV 204          
BLAST of EY695517 vs. ExPASy Swiss-Prot
Match: UFD1_MOUSE (Ubiquitin fusion degradation protein 1 homolog OS=Mus musculus GN=Ufd1l PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.996e-57
Identity = 102/186 (54.84%), Postives = 137/186 (73.66%), Query Frame = 1
Query:  145 FEQSYRCYPASFIEKPQ----IESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYXEP*KPI 690
            F   YRC+  S +  P     +E G KIIMPPSALD+L+ L+I YPMLF+L N  ++R++HCGVLEF+A+EG+ Y+P+WMM+NLLL+EG +V+V++V L   TY K QP + DFLDI+NPKA+LE  LRN++C+TTGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL Y EP +P+
Sbjct:   19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACMTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPKRPV 204          
BLAST of EY695517 vs. ExPASy Swiss-Prot
Match: UFD1_HUMAN (Ubiquitin fusion degradation protein 1 homolog OS=Homo sapiens GN=UFD1L PE=1 SV=3)

HSP 1 Score: 218.779 bits (556), Expect = 3.472e-56
Identity = 102/182 (56.04%), Postives = 134/182 (73.63%), Query Frame = 1
Query:  145 FEQSYRCYPASFIEKPQ----IESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYXEP 678
            F   YRC+  S +  P     +E G KIIMPPSALD+L+ L+I YPMLF+L N  ++R++HCGVLEF+A+EG+ Y+P+WMM+NLLL+EG +V+V++V L   TY K QP + DFLDI+NPKA+LE  LRN++CLTTGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL Y EP
Sbjct:   19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEP 200          
BLAST of EY695517 vs. ExPASy Swiss-Prot
Match: UFD1_DROME (Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster GN=Ufd1-like PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.939e-55
Identity = 103/200 (51.50%), Postives = 139/200 (69.50%), Query Frame = 1
Query:   85 FEYSFTVKMFFDGYGYHGTSFEQSYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYXE 675
            F +S    MF +G  +H      +Y+C+  S +   E+  +E G KIIMPPSALD L  L+++YPMLF+L N    R SH GVLEF+A+EG  Y+P+WMMENLLL EGDI+ +++V+LP  T+ K QPH+ DFLDI+NPKA+LE  LRN++CLT GD I + YN K Y + ++ETKP NA+SIIE D  V+F  P+ Y +
Sbjct:    2 FHFSGFNMMFPEGRNFHA-----NYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKD 196          
BLAST of EY695517 vs. ExPASy Swiss-Prot
Match: UFD1_SCHPO (Ubiquitin fusion degradation protein 1 OS=Schizosaccharomyces pombe GN=ufd1 PE=2 SV=4)

HSP 1 Score: 196.823 bits (499), Expect = 1.413e-49
Identity = 91/183 (49.73%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  145 FEQSYRCYPASFI---EKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNA---ISIIETDCEVDFAPPLDYXE 675
            F+  YRCYP + I   E+P +  G K+I+PPSAL++L+ L++ YPMLF+  N AAE+ +H GVLEFIAEEG +Y+PYWMM  L L+ GD+VRV N  + +G+YVKLQP + +FLDI++ +A+LE  LRN+S LT  D   + YN++ Y I +I+ +P ++   +S++ETD  VDF PP+ Y E
Sbjct:   32 FDTRYRCYPVAMIPGEERPNVNYGGKVILPPSALEKLSRLNVSYPMLFDFENEAAEKKTHGGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSVNFLDITDHRAVLENALRNFSTLTKSDIFEILYNDQVYQIKVIDVQPDDSRHVVSVVETDLVVDFDPPIGYEE 214          
BLAST of EY695517 vs. ExPASy Swiss-Prot
Match: UFD1_YEAST (Ubiquitin fusion degradation protein 1 OS=Saccharomyces cerevisiae GN=UFD1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.480e-48
Identity = 95/186 (51.08%), Postives = 127/186 (68.28%), Query Frame = 1
Query:  142 SFEQSYRCYPASF----IEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKP---SNAISIIETDCEVDFAPPLDYXEP 678
            +FE+ +RCYP +     I K     G KI +PPSAL +L+ L+I YPMLF+L  N   RV+H GVLEFIAEEG +Y+P WMME L +Q G ++++ +  +P G +VKL+P + DFLDIS+PKA+LE  LRN+S LT  D I ++YN K + I I+E KP   S +I +IETD   DFAPP+ Y EP
Sbjct:   20 TFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLVTDFAPPVGYVEP 205          
BLAST of EY695517 vs. ExPASy Swiss-Prot
Match: UFD1_CAEEL (Ubiquitin fusion degradation protein 1 homolog OS=Caenorhabditis elegans GN=ufd-1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.555e-40
Identity = 80/184 (43.48%), Postives = 118/184 (64.13%), Query Frame = 1
Query:  142 SFEQSYRCYPASFIEKP------QIESGDKIIMPPSALDRLASLHIDYPMLFELRNNAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYXE 675
            +++Q++  Y   F+         +I  G KI++P SAL+ L   +I  PMLF+L N A +RV+HCGVLEF A EG   +P WMM+ L L +GD +R+++ TLPK T+ KL+P + +FL+I+NPKA+LE  LR Y+CLT  D I  +Y  +     +++ KP+N++ IIE D  +DF PP  Y E
Sbjct:   20 NYDQTFVVYGPVFLPNATQSKISEINYGGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLWMMQQLGLDDGDTIRIESATLPKATFAKLKPMSLEFLNITNPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVVDLKPANSVCIIECDVNLDFDPPEGYVE 203          
The following BLAST results are available for this feature:
BLAST of EY695517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
UFD1_DICDI7.474e-5957.38Ubiquitin fusion degradation protein 1 homolog OS=... [more]
UFD1_RAT4.101e-5755.38Ubiquitin fusion degradation protein 1 homolog OS=... [more]
UFD1_MOUSE6.996e-5754.84Ubiquitin fusion degradation protein 1 homolog OS=... [more]
UFD1_HUMAN3.472e-5656.04Ubiquitin fusion degradation protein 1 homolog OS=... [more]
UFD1_DROME2.939e-5551.50Ubiquitin fusion degradation protein 1 homolog OS=... [more]
UFD1_SCHPO1.413e-4949.73Ubiquitin fusion degradation protein 1 OS=Schizosa... [more]
UFD1_YEAST3.480e-4851.08Ubiquitin fusion degradation protein 1 OS=Saccharo... [more]
UFD1_CAEEL4.555e-4043.48Ubiquitin fusion degradation protein 1 homolog OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695517 ID=EY695517; Name=EY695517; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGCTCTTATCTTCCCATCATCACAGTTTCTCTCCGTCTCTC
TTCGGTGCGGGAGCTGAAAGGTTGACTATCTTGGTTTGAATACTCATTCA
CAGTAAAAATGTTTTTTGATGGATATGGATATCATGGGACATCATTTGAG
CAGAGTTACCGATGTTACCCTGCATCATTTATTGAAAAGCCACAAATAGA
AAGTGGTGACAAAATTATAATGCCTCCTTCAGCCCTTGATCGCCTTGCAT
CTTTGCATATTGATTATCCAATGTTGTTTGAGCTACGTAATAATGCGGCT
GAGCGGGTTTCCCACTGTGGAGTTCTTGAGTTTATTGCAGAGGAAGGCAT
GATCTATATGCCATACTGGATGATGGAGAACCTGCTTTTACAAGAGGGAG
ATATTGTGCGAGTGAAAAATGTGACACTTCCAAAGGGAACATATGTCAAA
CTTCAACCTCACACAAAGGACTTTCTCGATATTTCTAATCCCAAAGCCAT
CTTGGAGACGACGTTAAGGAATTATTCCTGCTTGACCACTGGGGACAGTA
TTATGGTGGCATATAACAATAAGAAATATTACATTGACATTATAGAGACG
AAGCCTTCTAATGCAATAAGCATCATTGAGACTGACTGTGAGGTAGATTT
TGCACCTCCTCTGGATTATAANGAACCCTGAAAACCAATTGCATCTGCTT
CAAGTAAGGCAACAGCAAAAGCTGAAGAGGCTTCTGTTGAGACCGAACAA
AATTCAGCCCTTTTACTGGAGTAGCTAGACGGTTGGATGGGAAACCTTTG
ACATATCACCTCCTCCTGTCCTTCTTANGGTCAAAGACAGCAACTGCACG
TCTATGGTACTGGGCACCATCTGCAGGTCTACTTCACAAATGCTGCAGAC
AGCTCA
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