EY695513

Overview
NameEY695513
Unique NameEY695513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY695513 vs. ExPASy Swiss-Prot
Match: NSUN5_HUMAN (Putative methyltransferase NSUN5 OS=Homo sapiens GN=NSUN5 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.284e-22
Identity = 82/237 (34.60%), Postives = 113/237 (47.68%), Query Frame = 2
Query:  191 VLRGDARRRAVGSIKSLVYSPSVKNKKATYALVCQTLKHLSIIKQVLDSASILNSKWKREEELVYILTYDILFGQEISLVGDAEKFLM-LHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLELGKQ-FVVQKXXXXXXXXXXXXG------------------CDLHVHPLIVNGCVFLQGKASSMVAAALAPKLGWKGSDACSAPGKQTVHL 835
            VL G   R+  GSIK LVYS + +N K  YALVC+T ++ +++  V+ SA +L ++ K    L  +L Y++L G+     G   K L+  H+  ++  LA+L V   V   EDL+ +   P      PR+VRVNTLK   D  V    +Q F  Q             G                   DLH HPL   G + LQ +AS + A  L P  G    DAC+APG +T HL
Sbjct:   10 VLAGVESRQ--GSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLLRAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHL 244          
BLAST of EY695513 vs. ExPASy Swiss-Prot
Match: NSUN5_MOUSE (Putative methyltransferase NSUN5 OS=Mus musculus GN=Nsun5 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.626e-21
Identity = 79/237 (33.33%), Postives = 114/237 (48.10%), Query Frame = 2
Query:  191 VLRGDARRRAVGSIKSLVYSPSVKNKKATYALVCQTLKHLSIIKQVLDSASILNSKWKREEELVYILTYDILFGQEISLVGDAEKFLM-LHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD--VPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKXXXXXXXXXXXXG------------------CDLHVHPLIVNGCVFLQGKASSMVAAALAPKLGWKGSDACSAPGKQTVHL 835
            VL G   R+  GS+K LVYS + +N K  YALVC+T ++ +++  V+ SA +L ++ K    L  +L Y++L G+     G   K L+  H+  ++  LA+L V   V   EDL+     P      PR+VRVNTLK   + A+    +Q F  Q             G                   DLH HPL   G + LQ KAS + A  L+P  G    DAC+APG +T ++
Sbjct:   10 VLAGVESRQ--GSLKGLVYSSNFQNLKQLYALVCETQRYSAVLDAVIASAGLLRAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNEDLLQESSRPGQAYQVPRFVRVNTLKTRPEDAIDYFKRQGFSYQGRASSLEDLRALKGQHFLLDPLLPELLVFPAQTDLHEHPLYRAGHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTSYI 244          
BLAST of EY695513 vs. ExPASy Swiss-Prot
Match: YEY6_SCHPO (Putative methyltransferase C2C4.06c OS=Schizosaccharomyces pombe GN=SPAC2C4.06c PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.883e-15
Identity = 68/219 (31.05%), Postives = 106/219 (48.40%), Query Frame = 2
Query:  224 GSIKSLVYSPSVKNKKATYALVCQTLKHLSIIKQVLDSASILNSKWKREEELVYILTYDILF---GQEISLVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELG--KQFVVQKXXXXXXXXXXXXGCDLHVHP--------LIVNGCVFLQGKASSMVAAALAPKLGWKGS--DACSAPGKQTVHL 835
            GSIK L ++    + K TYALVC+TLK+  ++ +++  + +L      +E L  +L +D+L    G  IS  G  ++ ++ HK  +     +L V+  VKS E+L    + P V  PR++R+NT+K   D  +  LG  K   +++               + + P        L   G V +Q KAS   AA LA   G  G   D C+APG +T HL
Sbjct:   19 GSIKQLAFNSKKHDPKRTYALVCETLKYKPVLDEIIARSELL-----LKENLARVLVHDLLMSKRGLSIS-NGPIKECILRHKTRLNAEFVKLKVKKGVKSHEEL--ALKNP-VSLPRWLRINTIKSTKDEVLQGLGLDKVSSIEELGPDKFYIDDCVENLIAIDPSFPIVENSLYKEGKVIIQDKASCFPAAVLAGLTGHVGDIIDGCAAPGNKTTHL 228          
The following BLAST results are available for this feature:
BLAST of EY695513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
NSUN5_HUMAN4.284e-2234.60Putative methyltransferase NSUN5 OS=Homo sapiens G... [more]
NSUN5_MOUSE3.626e-2133.33Putative methyltransferase NSUN5 OS=Mus musculus G... [more]
YEY6_SCHPO3.883e-1531.05Putative methyltransferase C2C4.06c OS=Schizosacch... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-037-C05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY695513 ID=EY695513; Name=EY695513; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGGTTCTAGATCGCGAG
CGCGAGCCATGGCGCGCACTAAGACAGCGGCAACTGCCCCATCGGGAGCA
TCAGCGAAGACATCTCGAAACGGCCGACTAAGCAACGCTGAGCGGTCGGC
TTACTTCGCGAGGAGAGAAGCGGCGAAGGTTTTGCGGTTGGTCCTCCGAG
GCGACGCACGTCGCCGAGCCGTCGGCTCCATCAAGTCGCTCGTCTATAGC
CCCTCTGTGAAGAACAAAAAAGCCACTTACGCTTTGGTTTGTCAAACTCT
CAAACATCTCTCTATTATTAAACAAGTGTTGGACTCTGCTAGCATACTCA
ATAGCAAATGGAAGAGGGAAGAAGAATTGGTCTACATACTAACTTACGAC
ATCCTCTTTGGCCAGGAAATATCATTAGTAGGTGATGCAGAGAAGTTTCT
GATGCTCCATAAAGGTGCTATACAATTGGCTCTAGCTCAACTTTTAGTGA
GGAATAAGGTCAAGAGCATTGAAGACTTAATGGCACTTTATCAAACTCCT
GATGTTCCAAAGCCTCGTTACGTTCGTGTCAATACTCTGAAAATGGATGT
TGATTCGGCGGTGCTTGAATTGGGGAAGCAGTTTGTGGTCCAAAAGGATG
ACTTGGTTCCTGACTTATTGATACTCCCACCAGGTTGTGATTTGCACGTT
CATCCTCTGATCGTCAATGGATGTGTATTCTTGCAAGGAAAAGCAAGTTC
TATGGTAGCAGCAGCCCTAGCACCCAAACTAGGATGGAAGGGGTCTGATG
CCTGTTCAGCTCCTGGAAAACAAACTGTGCACCTAGCTGCTCTTATGAAA
GGAAAGGGAAAAATGAACATGGGAGCTAAATAAAGAAAGGGTAGACGTCT
CAAAACCC
back to top