EY692486

Overview
NameEY692486
Unique NameEY692486
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692486 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 2
Query:  599 ESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWD*SHSLSPAKPGSXMXXXXXXXXXXXXR-TXEWXTEV 859
            ESLPTP++EGEILSS NLKAFTFNELK ATRNFRPDSLLGEGGFG+V+KGW    +L+ +KPGS +            +   EW TEV
Sbjct:   51 ESLPTPRTEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEV 138          
BLAST of EY692486 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.904e-18
Identity = 49/86 (56.98%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  605 LPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWD*SHSLSPAKPGSXMXXXXXXXXXXXXR-TXEWXTEV 859
            LPT ++EGEILSS NLKAFTFNELK AT+NFR D+LLGEGGFG V+KGW    SL+ ++PGS +            +   EW TEV
Sbjct:   56 LPTLRTEGEILSSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEV 141          
BLAST of EY692486 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.954e-18
Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  578 SKEKGNSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWD*SHSLSPAKPGSXMXXXXXXXXXXXXR-TXEWXTEV 859
            S  K +S      K+EGEILSS+ +K+FTFNELK ATRNFRPDS++GEGGFG V+KGW    +L+P KPG+ +            +   EW TE+
Sbjct:   28 SSRKSSSTVAAAQKTEGEILSSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEI 122          
BLAST of EY692486 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.459e-17
Identity = 43/71 (60.56%), Postives = 58/71 (81.69%), Query Frame = 2
Query:  587 KGNSESL-PTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWD*SHSLSPAKPGSXM 796
            K +S S+ P+P++EGEIL S NLK+F+F ELK+ATRNFRPDS+LGEGGFG V+KGW    SL+ ++PG+ +
Sbjct:   31 KASSVSVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGL 101          
BLAST of EY692486 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.211e-17
Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 2
Query:  587 KGNSESLPT-PKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWD*SHSLSPAKPGS 790
            K +S S+ T P++EGEIL S NLK+FTF ELK ATRNFRPDS+LGEGGFG V+KGW    +L+ +KPG+
Sbjct:   32 KSSSVSIRTNPRTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGT 100          
BLAST of EY692486 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16
Identity = 38/59 (64.41%), Postives = 51/59 (86.44%), Query Frame = 2
Query:  614 PKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWD*SHSLSPAKPGS 790
            P++EGEIL ++NLK F+ +ELK+ATRNFRPDS++GEGGFG V+KGW    SL+P+KPG+
Sbjct:   41 PRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGT 99          
BLAST of EY692486 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.142e-14
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 2
Query:  593 NSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWD*SHSLSPAKPGSXMXXXXXXXXXXXXR-TXEWXTEV 859
            +S S    K+EGEILSS+ +K+F+FNELK ATRNFR DS++GEGGFG V++GW    +L+P K  S +            +   EW TE+
Sbjct:   27 SSSSATAHKTEGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEI 116          
BLAST of EY692486 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.396e-12
Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = 2
Query:  626 GEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWD*SHSLSPAKPGSXM 796
            G++L S NLK + F +LKTAT+NF+PDS+LG+GGFG VY+GW  + +L+P++ GS M
Sbjct:   63 GKLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGM 119          
The following BLAST results are available for this feature:
BLAST of EY692486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
APK2B_ARATH1.139e-2262.50Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
APK2A_ARATH2.904e-1856.98Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
BIK1_ARATH4.954e-1849.47Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK1A_ARATH2.459e-1760.56Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
APK1B_ARATH3.211e-1763.77Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
NAK_ARATH2.718e-1664.41Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y3545_ARATH1.142e-1446.67Probable receptor-like protein kinase At3g55450 OS... [more]
CX32_ARATH1.396e-1256.14Probable serine/threonine-protein kinase Cx32, chl... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-B09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692486 ID=EY692486; Name=EY692486; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGCCTCACGTTCACAGGCTTCTGCTTCTTCCTCTTCGTTTC
CTTAGCGCCGATTATTACTTTTATCTGCCTAATCTTATCTTATCATCATC
GATTGGCCCACTCGACTAACCAAACTGCACGTTGTGAAAAACCAACTTCA
AAACCGAAGACACTTGAAAGCTTCTTGTTAGTTTCCTCTTACTTAGAATC
GTTTTAGTCGGTGCTACATTTATTTAAAAATTACAACCAGCTGAACGAAC
AAAAGAAAGAGTTTTTTTTTTTGGTTTTTCAAAAAAGACAAAGCATATTT
TAAGTACGAAGAAATATGGGAAACTGTTTACAGCATTCTTCAGCTAGAGT
GGATTCCACCCAGAGCCCCCGCGCTACTTCTGGAAGATGAACTAAAGAAC
CAGGAGAACATGAAAACAATGGAGTAGAGTCTAAGTGGGTTGTAGCTTGG
AAGATGTTGCTAGTAGTGCAGTAAATGAAATTCCAGAACTCATTTTTCTC
TTCTGACATCAGGAGCCTCAAGAATTTCCACTAGATCTAGTCATTCTTCT
GCCCCTTCCACCCTTCCCATTCCACCTTCAAAAGAAAAAGGCAATTCTGA
AAGTCTTCCAACTCCAAAGTCTGAGGGTGAAATATTGTCGTCCTCAAATT
TGAAAGCCTTCACATTCAATGAGCTCAAGACTGCCACCAGAAACTTCCGT
CCTGACAGTCTTCTCGGCGAAGGTGGATTTGGTTTTGTTTACAAAGGATG
GGATTGATCACACTCACTTTCACCTGCTAAGCCTGGATCANGAATGGTCG
TTGCTGTCAAGAAGCTAAGCCTGAAGGTTNCCAGGACACANGAGTGGNTG
ACAGAAGTATTATCTTGGCAGCTCATCATCCAATCTGGNTAGCTAATGGG
GATTGCTGGAGGTG
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