EY692457

Overview
NameEY692457
Unique NameEY692457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692457 vs. ExPASy Swiss-Prot
Match: Y1927_ARATH (LIM and UIM domain-containing At1g19270 OS=Arabidopsis thaliana GN=At1g19270 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 6.451e-77
Identity = 130/191 (68.06%), Postives = 159/191 (83.25%), Query Frame = 2 
Query:    2 TNGAGLTPYRCHPFWAQKYCPSHEHDHTSRCCSCERLESWNTRYYSLEDGRSLCL*CMESAIMDTGDCQPLYHAIRDYYEGMNMKLDQQIPMLLVERQALNEAIVGEKNGYHHMPETRGLCLSEEQTVTSILRRPRIGGNRLVGMRTQPQKLTRKCEVTAILVLYGLPRLLTGAILAHELMPGWLRLKGYR 574
            TN AGL  YR HPFW QKYCPSHEHD T RCCSCER+E  NTRY  L DGR LCL C++SA+MDT  CQPLY  I+++YEG+NMK++Q++P+LLVERQALNEA  GEKNG++HMPETRGLCLSEEQTV+++ +R + G  +  G  T+P KLTR+CEVTAIL+L+GLPRLLTG+ILAHE+M  W+RLKG+R
Sbjct:  241 TNHAGLIEYRAHPFWVQKYCPSHEHDATPRCCSCERMEPRNTRYVELNDGRKLCLECLDSAVMDTMQCQPLYLQIQNFYEGLNMKVEQEVPLLLVERQALNEAREGEKNGHYHMPETRGLCLSEEQTVSTVRKRSKHGTGKWAGNITEPYKLTRQCEVTAILILFGLPRLLTGSILAHEMMHAWMRLKGFR 431
The following BLAST results are available for this feature:
BLAST of EY692457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1927_ARATH6.451e-7768.06LIM and UIM domain-containing At1g19270 OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692457 ID=EY692457; Name=EY692457; organism=Citrus sinensis; type=EST; length=948bp
CACAAATGGAGCTGGTTTGACCCCTTATAGGTGCCATCCATTTTGGGCCC
AAAAGTATTGTCCATCTCATGAACATGATCACACATCTCGCTGCTGTAGT
TGTGAGCGTCTTGAGTCTTGGAATACGAGGTACTATTCACTGGAAGACGG
GCGGAGTTTATGCTTATAGTGCATGGAATCCGCAATTATGGACACTGGTG
ATTGCCAGCCCCTGTACCATGCCATAAGAGACTATTACGAAGGAATGAAT
ATGAAGCTCGATCAGCAAATTCCAATGCTTCTTGTCGAAAGACAAGCACT
TAACGAAGCTATCGTTGGAGAGAAGAATGGCTACCATCACATGCCTGAGA
CAAGGGGCTTGTGTCTTTCTGAGGAGCAGACAGTCACAAGTATACTCAGG
AGACCGAGAATTGGAGGCAACAGATTGGTGGGGATGAGGACTCAACCTCA
GAAGCTGACTCGAAAATGTGAAGTTACTGCCATTCTTGTTCTCTATGGCC
TTCCAAGACTATTGACGGGTGCTATTCTTGCCCATGAATTGATGCCGGGA
TGGTTACGTCTTAAAGGCTACCGCCAATCTTAATCCTGAATATAAAGGAA
GGTATCTGGTCGGGGGCTTTTCATACATGGTGGCTTGGAATCGGAAGTTT
TGCCAGAATACAGAAAACCTTGGCATTCCACATCTTCTGCTTTCAAAATT
TTCCATCGTCTTTAAAAAAAAGGGGGAAAATCCGAAGGGTTTGAAAAGAA
ACTGGGGGGGAGTTTTTTCCTGCAATCAATTTTGGCCCATAACGCTTTCA
CCTTGCCGTAGGGGGGAAGGAATTTAGAAATTTGGTAAAAGGGCACCCGT
TCCTTTGAAATTTGGGGTTTTCCCGCCGAAACCCCCGGGGAACCCCATTT
CTCCCCTTTTTAAGGGGAGAAATTTTCCCCGTTTTGTGGAAATGAGTG
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