EY692439

Overview
NameEY692439
Unique NameEY692439
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:553..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.504e-43
Identity = 87/94 (92.55%), Postives = 89/94 (94.68%), Query Frame = 2
Query:    2 NSRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 283
            NSRSD+  +SVFREGVKYGA IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKY EVKPAL NMVAAAKLLRTQLASAK
Sbjct:  671 NSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYAEVKPALENMVAAAKLLRTQLASAK 764          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.052e-41
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 2
Query:    2 NSRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 283
            NSRS +  +SVFREGVKYGA IGPGVYDIHSPRIPSTEEIADRINKMLAVL+TNILWVNPDCGLKTRKY EVKPAL NMV+AAKL+RTQLASAK
Sbjct:  672 NSRSSEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLDTNILWVNPDCGLKTRKYAEVKPALENMVSAAKLIRTQLASAK 765          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.061e-41
Identity = 82/94 (87.23%), Postives = 88/94 (93.62%), Query Frame = 2
Query:    2 NSRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 283
            NSRSD+  +SVFREGVKYGA IGPGVYDIHSPRIPS+EEIADR+NKMLAVLE NILWVNPDCGLKTRKYTEVKPAL NMV AAKL+R+QLASAK
Sbjct:  672 NSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRVNKMLAVLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLIRSQLASAK 765          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.742e-39
Identity = 79/94 (84.04%), Postives = 85/94 (90.43%), Query Frame = 2
Query:    2 NSRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 283
            NSRSD+  +SVFREGVKYGA IGPGVYDIHSPRIP TEE+ADRI KMLAVLE+N+LWVNPDCGLKTRKY EV PALSNMVAAAK LR +LASAK
Sbjct:  672 NSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEELADRIRKMLAVLESNVLWVNPDCGLKTRKYGEVNPALSNMVAAAKQLRQELASAK 765          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BURVG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=metE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.281e-20
Identity = 50/89 (56.18%), Postives = 61/89 (68.54%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRSD   +  F +G +Y   IGPGVYDIHSP IP+ E I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK LR++L
Sbjct:  676 SRSDMELLDAF-DGFRYPNEIGPGVYDIHSPNIPTQEHIVGLMRKAAERIPAQRLWVNPDCGLKTRRWAEVLPALTNMVAAAKTLRSEL 763          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_CYTH3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=metE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.081e-20
Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 277
            SRS    +  F +   Y   IGPGVYDIHSPRIP+T+E+AD +NK + VL    +WVNPDCGLKTR++ E + AL NMVAAA+ +R ++ +
Sbjct:  684 SRSQMELLDAFVD-FNYPNEIGPGVYDIHSPRIPTTDEMADLLNKAMHVLPVRNIWVNPDCGLKTRRWPETEAALINMVAAAQKIRKEITT 773          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_PSYIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Psychromonas ingrahamii (strain 37) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.132e-19
Identity = 50/86 (58.14%), Postives = 57/86 (66.28%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 262
            SRSD   + VF E   Y   IGPGVYDIHSP IP  E++   + K    +    LWVNPDCGLKTR++ EVKPAL NMVAAAK LR
Sbjct:  681 SRSDMVLLDVF-EAFSYPNGIGPGVYDIHSPNIPDVEQMVSLMKKAALRIPAEQLWVNPDCGLKTRRWEEVKPALLNMVAAAKKLR 765          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BURS3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia sp. (strain 383) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.132e-19
Identity = 50/89 (56.18%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 271
            SRSD   +  F +  KY   IGPGVYDIHSP IP+ E I   + K    +    LWVNPDCGLKTR++ EV PAL+NMVAAAK LR Q+
Sbjct:  676 SRSDMELLDAF-DNFKYPNEIGPGVYDIHSPNIPTQEHIVGLMKKAAERIPAERLWVNPDCGLKTRQWAEVIPALTNMVAAAKTLRNQV 763          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_BLOPB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia pennsylvanicus (strain BPEN) GN=metE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.132e-19
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 2
Query:    5 SRSDDTFMSVFREGVKYGALIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 280
            +RSD+  +   R  +K    IGPG+YDIHSP  P+  ++  RIN++L  +    LW+NPDCGLKTR + E+K +L+NMV+AAKLLR Q  S+
Sbjct:  673 ARSDEKILKSIRHVIKNLNEIGPGIYDIHSPNKPTQNDLIRRINQLLKYIPEQRLWINPDCGLKTRSWPEIKHSLNNMVSAAKLLRKQFYSS 764          
BLAST of EY692439 vs. ExPASy Swiss-Prot
Match: METE_DICDI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Dictyostelium discoideum GN=metE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.478e-19
Identity = 49/89 (55.06%), Postives = 60/89 (67.42%), Query Frame = 2
Query:    2 NSRSDDTFMSVFREGVKYGAL--IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 262
            NS+SD   +  F    KYG    IGPG+YDIHSPRIPS E++ DR+ +ML  L TN+LW+NPDCGLKTR+    + AL NMV  AK  R
Sbjct:  733 NSKSDLKLLKAFE---KYGYTNEIGPGLYDIHSPRIPSVEDMKDRVEQMLKYLSTNLLWINPDCGLKTREPETTRLALINMVKVAKQFR 818          
The following BLAST results are available for this feature:
BLAST of EY692439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_SOLSC2.504e-4392.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO1.052e-4188.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ARATH3.061e-4187.235-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR3.742e-3984.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURVG2.281e-2056.185-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CYTH35.081e-2052.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSYIN1.132e-1958.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURS31.132e-1956.185-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOPB1.132e-1948.915-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DICDI1.478e-1955.065-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692439 ID=EY692439; Name=EY692439; organism=Citrus sinensis; type=EST; length=570bp
GAACTCTCGTTCTGATGACACGTTTATGTCTGTCTTCCGTGAGGGAGTCA
AGTATGGTGCTCTTATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGA
ATACCATCAACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGT
GCTAGAAACCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTC
GCAAGTACACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCC
AAGCTACTCCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGAT
TGGAGGGATACTTCCTGAGCCATTGATTTTTTTTTTTTTTTCACTTTAAA
CAAAGAAAGAAAATTCCTGTCTTATTACCTATTCGAATAACTGTGGGTCG
TGATGTGATGAAAATTTTCCGTATGCATATTATGCACTATTGAGCAATTG
GCTTCTATTTTTCTTTGCTTGTATTTTCCGTTTTTAAAGGCCCCGGCTTG
CTATCAGTGGCCGTAAATCGATGGAATACCTTTACTGGTTTGTGCATTAA
AAAAAAAAAAAAAAAAAAAA
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