EY692438

Overview
NameEY692438
Unique NameEY692438
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length971
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG3_ARATH (ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana GN=ATPC PE=1 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 2.016e-81
Identity = 153/176 (86.93%), Postives = 165/176 (93.75%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 537
            +G   KAI+ RDSK DI L +TEL KNPLNY QVSVLADDILKNVEFDALRI+Y+KFHSVV+FLPT++TVLSPE++E+E+E GGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSE GARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE
Sbjct:  147 VGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILKNVEFDALRIVYNKFHSVVAFLPTVSTVLSPEIIEKESEIGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 322          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG3_IPOBA (ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas GN=ATPC PE=1 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 5.866e-81
Identity = 155/177 (87.57%), Postives = 167/177 (94.35%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 540
            LG   KA LVRDSKKDI LIITELQKNPLNYTQVSV+ADDILKNVEFDALRI+++KF SVVSF+PTM+TVLSPE+VERE+ESGGKLG+LDSYEIEG E+K E+LQNL EFQFS V+FNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG
Sbjct:  150 LGEKAKAQLVRDSKKDIELIITELQKNPLNYTQVSVVADDILKNVEFDALRIVFNKFQSVVSFVPTMSTVLSPEVVERESESGGKLGDLDSYEIEGAESKSEVLQNLTEFQFSSVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 326          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_METC4 (ATP synthase gamma chain OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=atpG PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.586e-28
Identity = 78/171 (45.61%), Postives = 104/171 (60.82%), Query Frame = 1
Query:   34 LVRDSKKDIALIITELQKN-PLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            ++R   +D  +   +++ N P++Y   + +ADDIL   E   FD   + YS+F SV+S +PT   ++  EL   E  S    G   + E E  E    IL+ L     +  +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct:  128 VLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGASATGAGSDAAMEFEPNEET--ILETLLPKNLTVQIFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 296          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_METEP (ATP synthase gamma chain OS=Methylobacterium extorquens (strain PA1) GN=atpG PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.761e-28
Identity = 77/171 (45.03%), Postives = 104/171 (60.82%), Query Frame = 1
Query:   34 LVRDSKKDIALIITELQKN-PLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            ++R   +D  +   +++ N P++Y   + +ADDIL   E   FD   + YS+F SV+S +PT   ++  EL   E  +    G   + E E  E    IL+ L     +  +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct:  128 VLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGAAATGAGSDAAMEFEPNEET--ILETLLPKNLTVQIFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 296          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_METPB (ATP synthase gamma chain OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=atpG PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.828e-28
Identity = 77/171 (45.03%), Postives = 106/171 (61.99%), Query Frame = 1
Query:   34 LVRDSKKDIALIITELQKN-PLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            ++R   +D  +   +++ N P++Y   + +ADDIL   E   FD   + YS+F SV+S +PT   ++  EL + +  + G  G   + E E  E    IL+ L     +  +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct:  128 VLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKIIPAELPQTDGAAKGA-GSDAAMEFEPSEET--ILETLLPKNLTVQVFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 295          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_DROME (ATP synthase subunit gamma, mitochondrial OS=Drosophila melanogaster GN=ATPsyn-gamma PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 6.370e-27
Identity = 70/176 (39.77%), Postives = 112/176 (63.64%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            +G   +AIL R   K+I ++  E+ + P  +   S +A+++L+   ++   +I+Y++F SVVS+  +   + S   VE+      KL   DS +        +++++  EF  + ++F  + E ACSEQ +RM+AMD++S+NAGEM+D+LTLT+NRTRQA IT ELIEIISGA+AL
Sbjct:  132 VGDKSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTLPIFSGSTVEKSE----KLAVYDSLD-------SDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_PARDP (ATP synthase gamma chain OS=Paracoccus denitrificans (strain Pd 1222) GN=atpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.421e-26
Identity = 71/150 (47.33%), Postives = 96/150 (64.00%), Query Frame = 1
Query:   94 LNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            + Y     +AD+IL    N EFD   + Y++F SV+S +PT   V+ P ++E      G+ G    Y+ E  E    IL +L     +  +F A+LENA SEQGARM+AMD+++RNAG+M+DRLT  YNR+RQA+IT ELIEIISGA AL
Sbjct:  149 IGYDNARAIADEILDRFDNGEFDVATLFYNRFESVISQVPTARQVI-PAVIEE-----GEAGASSLYDYEPDENA--ILNDLLPRSVATQVFAALLENAASEQGARMTAMDNATRNAGDMIDRLTTVYNRSRQAAITKELIEIISGAEAL 290          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_PELUB (ATP synthase gamma chain OS=Pelagibacter ubique GN=atpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.129e-26
Identity = 74/170 (43.53%), Postives = 101/170 (59.41%), Query Frame = 1
Query:   34 LVRDSKKDIALIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            L R  K  I   I+      +NY     +   I++N E   FD   I Y+KF +V++ +P    ++  +  E E  S       D+YE E  E   EIL NL     S  +F A+LEN+ SEQG+RMSAMD+++RNAGEM+D+LT+ YNR+RQA+IT ELIEIISGA +L
Sbjct:  129 LKRVYKDAIVERISFKDSKTINYLDAEKVGKMIIENFEKEEFDVCTIFYNKFKNVITQIPQEQQIIPLKTSEAEENSSE-----DNYEFEPDED--EILSNLLPKNISTQIFKAMLENSASEQGSRMSAMDNATRNAGEMVDKLTIEYNRSRQAAITKELIEIISGAESL 291          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_METS4 (ATP synthase gamma chain OS=Methylobacterium sp. (strain 4-46) GN=atpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.569e-25
Identity = 75/179 (41.90%), Postives = 103/179 (57.54%), Query Frame = 1
Query:   10 LGRAPKAILVRDSKKDIALIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            +G+    IL R+ +  I  +I       L +     +A ++L   E   FD   + YS+F SV+  +PT     + +++  E    G+  + D+ YE E  E  GEIL  L     +  +  A+LENA SEQGARMSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct:  121 VGKKGYDILRREFRDQIVELIELRGVRQLGFDNAETIAQNLLGRFEAGEFDIATLFYSRFRSVIVQIPT-----AQQIIPAEIPPAGEAAQTDAAYEYEPDE--GEILAALLPKNLTVQILRALLENAASEQGARMSAMDNATRNAGEMIKKQTLVYNRTRQAQITKELIEIISGAEAL 292          
BLAST of EY692438 vs. ExPASy Swiss-Prot
Match: ATPG_JANSC (ATP synthase gamma chain OS=Jannaschia sp. (strain CCS1) GN=atpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.569e-25
Identity = 68/152 (44.74%), Postives = 96/152 (63.16%), Query Frame = 1
Query:   94 LNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSP--ELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 534
            L Y   + +A D+L   E   FD   I +++F SV+S +PT   ++    E VE   ++    G L  YE     ++  +L++L     +  +F A+LEN  SEQGARMSAMD+++RNAG+M+DRLT+ YNR+RQA IT+ELIEIISGA AL
Sbjct:  149 LGYADAASIATDVLNRFEEDEFDVATIFFNRFESVISQIPTATQIIPAVFEDVEEADDTSKDSGTLYEYE----PSEEAVLEDLLPRGIATQIFTALLENGASEQGARMSAMDNATRNAGDMIDRLTIEYNRSRQAVITSELIEIISGAEAL 296          
The following BLAST results are available for this feature:
BLAST of EY692438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG3_ARATH2.016e-8186.93ATP synthase subunit gamma, mitochondrial OS=Arabi... [more]
ATPG3_IPOBA5.866e-8187.57ATP synthase subunit gamma, mitochondrial OS=Ipomo... [more]
ATPG_METC42.586e-2845.61ATP synthase gamma chain OS=Methylobacterium chlor... [more]
ATPG_METEP5.761e-2845.03ATP synthase gamma chain OS=Methylobacterium extor... [more]
ATPG_METPB9.828e-2845.03ATP synthase gamma chain OS=Methylobacterium popul... [more]
ATPG_DROME6.370e-2739.77ATP synthase subunit gamma, mitochondrial OS=Droso... [more]
ATPG_PARDP2.421e-2647.33ATP synthase gamma chain OS=Paracoccus denitrifica... [more]
ATPG_PELUB4.129e-2643.53ATP synthase gamma chain OS=Pelagibacter ubique GN... [more]
ATPG_METS41.569e-2541.90ATP synthase gamma chain OS=Methylobacterium sp. (... [more]
ATPG_JANSC1.569e-2544.74ATP synthase gamma chain OS=Jannaschia sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-E10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692438 ID=EY692438; Name=EY692438; organism=Citrus sinensis; type=EST; length=971bp
AAACGTCATCTTGGGAGAGCCCCTAAAGCAATATTAGTACGTGACTCGAA
GAAAGATATTGCCCTTATCATAACTGAGTTACAGAAAAATCCTCTAAATT
ATACCCAGGTTTCCGTTCTTGCAGATGATATCTTAAAGAATGTAGAATTT
GATGCTTTGAGGATTATCTATAGCAAGTTCCATTCTGTGGTCTCCTTTCT
GCCGACAATGGCAACTGTATTATCGCCTGAGCTTGTGGAGAGAGAAGCCG
AATCTGGGGGAAAGCTTGGTGAGCTAGACTCCTATGAAATTGAAGGCGGT
GAAACAAAGGGTGAAATACTTCAAAATCTGGCTGAGTTCCAATTCTCTTG
TGTCATGTTCAATGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGGGCAA
GGATGTCTGCCATGGATAGCTCAAGCAGAAATGCGGGAGAAATGCTTGAT
CGCCTCACTCTTACTTATAACAGAACTCGTCAAGCATCTATCACCACCGA
GTTGATTGAGATTATATCTGGAGCATCAGCACTGGAAGGCTGATTACAAA
AGCGACAGTGCTCACTTTTCTTGACAGTGACGAAATAAATTCCTTGGTGG
AGGCTTTGTTCCAACTTCATTGTGGTACTTTCATAAGAGGTTTTGTTGAG
CTACTCCAATAATCTCTCCAGTGGCAAAACTTCCTTTTTGGGGAATAAAC
AATTATACTTGGGAAAATTTTCAATAATGGTTTTTGAATTCCCGAGGGAG
AGAACAAGATCTAGTAGGATCTTATAAAAAAAAAAAAAATAAATAAGGGG
GCGGCCCGCTCCTAAAGGAACCCAAACTTTAACTTACCCCGGGGATGGCC
AACACCCAAAACCTCTTTCTAATTGGGGTCCCCCAAAAATTTCAATTCCC
CCGGGGGGCCCGCCCTTTTTTAAAACCGCGCGGGGGGTCGGGGGAGAAAA
TCCCCCTGGGGGCGGTATTCA
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