EY692406

Overview
NameEY692406
Unique NameEY692406
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length987
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692406 vs. ExPASy Swiss-Prot
Match: FABH_THETN (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Thermoanaerobacter tengcongensis GN=fabH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.264e-11
Identity = 50/136 (36.76%), Postives = 69/136 (50.74%), Query Frame = -1 
Query:   73 EATMIGIKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGI*AMKGFMEATGL 480
            E    GI    SY+P   + N+         +E+I  + G       D +Q TSDL  EA       + +LK E +D +IV T   D    P TA IVQ  LG   + AAFDIS+GCSG++YG+   + F+E TG+
Sbjct:    3 EKIAAGILGTGSYLPEKILTNFDLEKMVDTSDEWITTRTGIKERRIADPSQATSDLATEASKRAL-EDANLKPEDLDMIIVATVTPDMN-FPSTACIVQANLGA-LNAAAFDISVGCSGFIYGLAIAQQFVE-TGM 134
[Close]
BLAST of EY692406 vs. ExPASy Swiss-Prot
Match: FABH_HELHP (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Helicobacter hepaticus GN=fabH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.586e-11
Identity = 53/146 (36.30%), Postives = 74/146 (50.68%), Query Frame = -1 
Query:   34 IKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGI*AMKGFMEATGLKK---EGAGDRRSVLE 462
            +KSIASY+P   I N         ++E+I  + G         +Q+TSDL  EA          ++ + IDA+IV T + D   +P TA I   KLG+    AAFDIS  CSG+VY +   K F+E+   K+    GA    SVL+
Sbjct:    8 LKSIASYIPPTCISNVDFEKTLDTNDEWITKRTGIKTRYFALPSQQTSDLAYEAGKKAI-ERAGIEPKDIDAVIVATLSPDYLTMPSTACITSFKLGIENK-AAFDISAACSGFVYLLSLAKSFIESGTYKQILIIGAEKTSSVLD 151
The following BLAST results are available for this feature:
BLAST of EY692406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
FABH_THETN2.264e-1136.763-oxoacyl-[acyl-carrier-protein] synthase 3 OS=The... [more]
FABH_HELHP6.586e-1136.303-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Hel... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-B08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692406 ID=EY692406; Name=EY692406; organism=Citrus sinensis; type=EST; length=987bp
GTCCGGGGTCCGGGAATTCCCGGGTCGACGATCTTCGAGTACGGATCGGC
GGTCACCAGCACCCTCTTTTTTCAGGCCAGTGGCTTCCATGAAGCCCTTC
ATCGCCTAGATGCCGTAGACATAGCCCGAGCAGCCCAGGGAAATATCAAA
GGCCGCCACGTGAGTCGGCAGGCCCAGTTTGTCCTGGACGATGGCGGCGG
TGTGAGGCAAGCCCTCTTCGTCGCCGTTCTGGGTGACGACGATCAGCGCA
TCGATGGATTCGCGCTTCAAATCGGGGTTGTTGGCAAACAAGGCGTTGAC
CGCCTCGACGCACAGATCGGAGGTTTCCTGTGCAGCATCCTTGCGCGGCA
GGAACGCCGAACCGATCTTGCCAATGATGAATTCTTCATCCTTGGCGAAT
TTGGCACCCTGGGCGTAGTTATCGATCCCGTCTGCCGGCACGTAACTGGC
GATGCTTTTTATGCCAATCATTGTGGCTTCCCAATACTAAATAGCTGGAG
AACACCCCGCGAGACACGTCGCCGGGTGCTGACAATAATGGGGATAACCC
CGCAAAAAACTCGCCGAAAACCGCCTTTACACCTTGGCGGCAGGCCCTCG
CAGAGACCTGGCGACGACCTATCCTTTTCACACGATACAGTGAAGATGCG
CTTTATGACTCACAGGTCACTCATTTTTCTGCGCTTTGTGCGAAACACGG
GGACATACAAGCGCCAAAAACCACAACGGCCCACCCCGTTTCCAGGGTGA
ACCCCCAGGTTTGCAGCCGCTCGAATCACATCTTGCTGAAAAGGCTTCAC
TGGGAAAATTTTCCCAAACGCCAGTTGCGAGGGCGGCACCAGGGTCCGGC
TGCAGGGCCGGGTCAATGGGCGGTTTTGCCCCCTTTCAACCTTTGGGCCG
GGGACAAACATTGGGGGGAACATATTGGGCCCGGGCCCCCGGGCTGGGGG
GTTTTCTCCCGGGCCCCTGGGATAACCCCCCCCCCCC
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