EY692396

Overview
NameEY692396
Unique NameEY692396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1073
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692396 vs. ExPASy Swiss-Prot
Match: P4H_MIMIV (Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L593 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.422e-15
Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1
Query:  100 DTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFSDTFN-----LKRGGQRIATMLMYLSDNVEGGETYFPMAGSGECSCGEKVVKGLSVKPVQGDAVLF 489
            D++   G   N+R S  M++S   K  PM++ I + I     VP +N E +QV+RY  +QYY  HHD   D+       ++RGGQRI T+L+YL++    G TYFP                   KP  GDA++F
Sbjct:   85 DSQVLSGTDKNIRNSQQMWIS---KNNPMVKPIFENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEFIERGGQRILTVLIYLNNEFSDGHTYFPNLNQ-------------KFKPKTGDALVF 203          

HSP 2 Score: 23.8682 bits (50), Expect = 5.422e-15
Identity = 8/24 (33.33%), Postives = 14/24 (58.33%), Query Frame = 3
Query:  522 PINLDG*CEVPSGKKWSSTIWMKQ 593
            P +L     V SG+KW + +W ++
Sbjct:  215 PYSLHAGMPVTSGEKWIANLWFRE 238          
BLAST of EY692396 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.946e-11
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 1
Query:   64 IARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFSDTFN--LKRGGQRIATMLMYLSDNVEGGETYFPMAGS 414
            +A+P L  +TV D KTG    ++ R S   +L  EE   P++  + +R+   + + V+  EL+QV  Y     Y+PH D+    F+  LK  G R+AT L Y+SD   GG T FP  G+
Sbjct:  357 LAKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFPDFGA 473          
BLAST of EY692396 vs. ExPASy Swiss-Prot
Match: P4HA2_HUMAN (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.541e-11
Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 1
Query:   64 IARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFS----DTFNLKRGGQRIATMLMYLSDNVEGGETYFPMAGS 414
            IA+P L  +TV D KTG    ++ R S   +L  EE   P++  + +R+   + + V+  EL+QV  Y     Y+PH D+      DTF     G R+AT L Y+SD   GG T FP  G+
Sbjct:  356 IAKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPDLGA 474          
BLAST of EY692396 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.957e-11
Identity = 50/146 (34.25%), Postives = 68/146 (46.58%), Query Frame = 1
Query:   64 IARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFS----DTFNLKRGGQRIATMLMYLSDNVEGGETYFPMAGSGECSCGEKVVKGLSVKPVQGDAVLF 489
            +A+P L  +TV D +TGK   ++ R S   +LS  E   P++  I  RI   + + V   E +QV  Y     Y+PH D+      D F     G RIAT L Y+SD   GG T FP  G+             SV P +G AV +
Sbjct:  337 LAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYES--PVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEVGA-------------SVWPKKGTAVFW 467          

HSP 2 Score: 20.7866 bits (42), Expect = 2.957e-11
Identity = 7/17 (41.18%), Postives = 9/17 (52.94%), Query Frame = 3
Query:  543 CEVPSGKKWSSTIWMKQ 593
            C V  G KW S  W+ +
Sbjct:  485 CPVLVGNKWVSNKWLHE 501          
BLAST of EY692396 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.834e-11
Identity = 50/146 (34.25%), Postives = 67/146 (45.89%), Query Frame = 1
Query:   64 IARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYFS----DTFNLKRGGQRIATMLMYLSDNVEGGETYFPMAGSGECSCGEKVVKGLSVKPVQGDAVLF 489
            +A+P L  +TV D +TGK   +  R S   +LS  E   P++  I  RI   + + V   E +QV  Y     Y+PH D+      D F     G RIAT L Y+SD   GG T FP  G+             SV P +G AV +
Sbjct:  355 LAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYED--PVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEVGA-------------SVWPKKGTAVFW 485          

HSP 2 Score: 20.7866 bits (42), Expect = 3.834e-11
Identity = 7/17 (41.18%), Postives = 9/17 (52.94%), Query Frame = 3
Query:  543 CEVPSGKKWSSTIWMKQ 593
            C V  G KW S  W+ +
Sbjct:  503 CPVLVGNKWVSNKWLHE 519          
BLAST of EY692396 vs. ExPASy Swiss-Prot
Match: P4HA2_MOUSE (Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.334e-11
Identity = 43/121 (35.54%), Postives = 62/121 (51.24%), Query Frame = 1
Query:   64 IARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLRYEKDQYYKPHHDYF----SDTFNLKRGGQRIATMLMYLSDNVEGGETYFPMAGS 414
            IA+P L  +TV D KTG    ++ R S   +L  EE   P++  + +R+   + + V+  EL+QV  Y     Y+PH D+      D F     G R+AT L Y+SD   GG T FP  G+
Sbjct:  358 IAKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDLGA 476          
The following BLAST results are available for this feature:
BLAST of EY692396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
P4H_MIMIV5.422e-1535.56Putative prolyl 4-hydroxylase OS=Acanthamoeba poly... [more]
P4HA2_CHICK1.946e-1136.13Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gal... [more]
P4HA2_HUMAN2.541e-1136.36Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapie... [more]
P4HA1_CHICK2.957e-1134.25Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gal... [more]
P4HA1_RAT3.834e-1134.25Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus nor... [more]
P4HA2_MOUSE4.334e-1135.54Prolyl 4-hydroxylase subunit alpha-2 OS=Mus muscul... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-A09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692396 ID=EY692396; Name=EY692396; organism=Citrus sinensis; type=EST; length=1073bp
CCGGGAATTCCCCGGGTCCGACCACGCGTTCCGGCATGGAGGAATGCGAC
TATCCCTCTTGTTATTGCCCGTCCTCATCTTCAAGTCTCCACTGTTGTGG
ATACAAAAACAGGGAAGGGAATCAAGAGTAATGTAAGGACAAGTTCTGGT
ATGTTTTTGAGTCCGGAAGAGAAAAAGTACCCAATGATACAGGCAATTGA
AAAAAGGATTTCTGTCTTTTCTCAAGTACCAGTAGAAAATGGGGAGCTCA
TCCAAGTTTTAAGGTATGAAAAAGATCAGTATTACAAGCCCCATCACGAT
TACTTTTCAGACACTTTCAACTTGAAGCGTGGCGGTCAGCGGATAGCAAC
AATGCTTATGTATTTAAGTGATAATGTTGAAGGGGGAGAAACATATTTTC
CTATGGCTGGTTCGGGTGAATGTAGCTGTGGTGAGAAGGTTGTGAAAGGG
CTGTCTGTAAAACCAGTTCAAGGAGATGCGGTGCTTTTTTTGGAGACTGG
AGCTAAACGGGCAATCAAATTCCAATTAACTTGGATGGATGATGTGAGGT
TCCTTCCGGAAAAAAATGGTCCTCTACAATATGGATGAAGCAAATACCTA
CCTCTTGATTTTTTTCAGATTGGCCATTTTTTTTTAACTAACTGAATTGG
CTTCCCCGGGGATACATCTTGGATTAAAGAAATATAATTAAGATATTTAA
ACAAAAATTAATAAAAAAGTTTAAAAATAAAAAAAAAAAAAAATATAGGT
ATGACGAATCATAAAAAATTCAAATCATAAACAAACACAATCAATGTCAA
CAATAAATAATCCTTTCAATTAGGAATCCAACAAAATTTAAAATTCAACT
GGGCACATAATTTTATAAAACAAACTGGTAACAGGGGAAAAAATCCATGG
GTCATCAACCCCAACTTTAAAACTCGCACTTTGTCCATCAATATTACTCC
CTTTATATGACAATCCATGAAGAATAATTAAAAATCTAAAAATATGTTGA
CCCACACATCATATTGTTACTACTTTATCTCCACAATCATTTGTGGATTG
AAATCAACCTTAAAATGAAAGAG
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