EY692393

Overview
NameEY692393
Unique NameEY692393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692393 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.649e-22
Identity = 69/194 (35.57%), Postives = 97/194 (50.00%), Query Frame = 1
Query:   37 NVLRRSDSLTFSRYNTASNVNNGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMDMGSTTNNAFIKPAGLKNKSEVSSTINHL-HSSSFQPTKNDLLCSPRQVL-LDKRDALVASPV-LAQPRSTQEQLTQHYDNCHHLVHNMXXXXXXXXXXXXSLKKMAEAVPQCGSSNMLGGFVEG 609
            N+L+RSD   F+RY+T    N G  G   S S   NS E +K  S+C ++S+S+   + Q SNG SNN DMGS+T NA  KP+  + K    S +    H+S+F P +     SP  V+  DK D  +A+ V +  P   Q    QH+ + H+ VH M            S      +  QCGSSN+    +EG
Sbjct:  458 NILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNNDMGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQRQ--TSPANVVGKDKVDEGIANGVNVGHPVDVQNSFMQHHHHVHYYVHVMTQQQQQPSIERGS------SDAQCGSSNVFDPPIEG 643          

HSP 2 Score: 26.1794 bits (56), Expect = 2.649e-22
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  609 NAGN*HVNGNASGHNHGKNGQK 674
            +A N  VNG+ SG ++G NGQ+
Sbjct:  644 HAANYSVNGSFSGGHNGNNGQR 665          
BLAST of EY692393 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.649e-22
Identity = 69/194 (35.57%), Postives = 97/194 (50.00%), Query Frame = 1
Query:   37 NVLRRSDSLTFSRYNTASNVNNGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMDMGSTTNNAFIKPAGLKNKSEVSSTINHL-HSSSFQPTKNDLLCSPRQVL-LDKRDALVASPV-LAQPRSTQEQLTQHYDNCHHLVHNMXXXXXXXXXXXXSLKKMAEAVPQCGSSNMLGGFVEG 609
            N+L+RSD   F+RY+T    N G  G   S S   NS E +K  S+C ++S+S+   + Q SNG SNN DMGS+T NA  KP+  + K    S +    H+S+F P +     SP  V+  DK D  +A+ V +  P   Q    QH+ + H+ VH M            S      +  QCGSSN+    +EG
Sbjct:  458 NILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNNDMGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQRQ--TSPANVVGKDKVDEGIANGVNVGHPVDVQNSFMQHHHHVHYYVHVMTQQQQQPSIERGS------SDAQCGSSNVFDPPIEG 643          

HSP 2 Score: 26.1794 bits (56), Expect = 2.649e-22
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  609 NAGN*HVNGNASGHNHGKNGQK 674
            +A N  VNG+ SG ++G NGQ+
Sbjct:  644 HAANYSVNGSFSGGHNGNNGQR 665          
BLAST of EY692393 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.079e-20
Identity = 77/222 (34.68%), Postives = 102/222 (45.95%), Query Frame = 1
Query:   37 NVLRRSDSLTFSRYNTASNVNNGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMDMGSTTNNAFIKPAGLKNKSEVSSTIN-HLHSSSFQPTKNDLLCSPRQVLLDKRDALVASPVL--AQPRSTQEQLTQHYDNCHHLVHNMXXXXXXXXXXXXSLKKMAEAVPQCGSSNMLGGFVEGMLETNM*TEMPQAITMEKMGKNGNTTAI 693
            NVLRRSD   F+RY+T    N G  G + S S   NS E +K  S   ++S+S+  P+ Q SNG SNN DMGSTT N   KP+  K +    S +  + H+S+F P ++    SP      ++   VA+     AQP   Q  L QH     H VH              S +      PQCGSSN+    VEG                   G+NG+TTA+
Sbjct:  430 NVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTDSAYNMKSNSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHPAQH--WTSPANTTGKEKTDEVANNAAKRAQPGEVQSNLVQHPRPILHYVH-----------FDVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAV 638          
BLAST of EY692393 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.403e-20
Identity = 76/222 (34.23%), Postives = 101/222 (45.50%), Query Frame = 1
Query:   37 NVLRRSDSLTFSRYNTASNVNNGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMDMGSTTNNAFIKPAGLKNKSEVSSTIN-HLHSSSFQPTKNDLLCSPRQVLLDKRDALVASPVL--AQPRSTQEQLTQHYDNCHHLVHNMXXXXXXXXXXXXSLKKMAEAVPQCGSSNMLGGFVEGMLETNM*TEMPQAITMEKMGKNGNTTAI 693
            NVLRRSD   F+RY+T    N G  G + S S   N  E +K  S   ++S+S+  P+ Q SNG SNN DMGSTT N   KP+  K +    S +  + H+S+F P ++    SP      ++   VA+     AQP   Q  L QH     H VH              S +      PQCGSSN+    VEG                   G+NG+TTA+
Sbjct:  430 NVLRRSDLSAFTRYHTPVASNQGGTGFVGSCSPHDNISEAMKTDSAYNMKSNSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHPAQH--WTSPANTTGKEKTDEVANNAAKRAQPGEVQSNLVQHPRPILHYVH-----------FDVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAV 638          
BLAST of EY692393 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.591e-16
Identity = 58/114 (50.88%), Postives = 68/114 (59.65%), Query Frame = 1
Query:   37 NVLRRSDSLTFSRYNTASNVNNGPGGNIESAS-QVVNSLEIIKKGSDCGIQSHSNGD---PLNQSSNGGSNNMDMGSTT-NNAFIKPAGLKNKSEVSSTINHLHSSSFQPTKND 363
            NVLRRS+   FSRYN ASN N   GGN+ S S Q  NS ++IKK ++     HSN +   P N  S+ GSNN DM STT NNAF KP   K  S  SS++ H   SSFQP   D
Sbjct:  453 NVLRRSEGSAFSRYNPASNANKISGGNLGSTSLQDNNSQDLIKK-TEAAYDCHSNMNESLPHNHRSHVGSNNFDMSSTTENNAFTKPGAPKVSSAGSSSVKH---SSFQPLPCD 562          
The following BLAST results are available for this feature:
BLAST of EY692393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PRR73_ORYSJ2.649e-2235.57Two-component response regulator-like PRR73 OS=Ory... [more]
PRR73_ORYSI2.649e-2235.57Two-component response regulator-like PRR73 OS=Ory... [more]
PRR37_ORYSJ1.079e-2034.68Two-component response regulator-like PRR37 OS=Ory... [more]
PRR37_ORYSI2.403e-2034.23Two-component response regulator-like PRR37 OS=Ory... [more]
APRR7_ARATH3.591e-1650.88Two-component response regulator-like APRR7 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-A04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692393 ID=EY692393; Name=EY692393; organism=Citrus sinensis; type=EST; length=924bp
GTACGGGTCCGGATTTCCGGGTCGACCCCGCGTCCGAATGTGTTGAGACG
TTCCGACTCCCTTACCTTCTCAAGGTATAACACAGCCTCAAATGTAAATA
ACGGTCCTGGTGGGAACATTGAAAGTGCTTCTCAAGTTGTTAATAGCTTA
GAAATCATAAAGAAAGGATCAGATTGTGGCATTCAATCTCATTCAAATGG
TGACCCTCTCAATCAGTCCTCAAATGGGGGAAGCAACAACATGGATATGG
GTTCTACCACCAATAATGCTTTTATCAAGCCAGCAGGTTTGAAGAACAAG
TCAGAAGTGTCATCTACCATCAATCACTTGCACTCATCTTCTTTCCAGCC
TACAAAAAATGACCTTTTATGCAGTCCTCGGCAAGTTCTGTTAGATAAGA
GGGATGCTTTGGTGGCCTCACCAGTGCTGGCCCAACCTAGGAGCACACAA
GAGCAGCTCACACAACATTATGATAACTGCCACCATCTTGTTCACAACAT
GCAACAGCAACATCTGCCACATGACCATGATCAATTATCACTGAAAAAGA
TGGCTGAAGCTGTTCCGCAATGTGGGTCATCAAATATGTTGGGTGGTTTT
GTTGAAGGAATGCTGGAAACTAACATGTAAACGGAAATGCCTCAGGCCAT
AACCATGGAAAAAATGGGCAAAAATGGAAACACCACTGCAATTGAATGGC
TTGAAGGGAGAAATGTAAAAAGCAAATCTGGGTATTGCTGGAAAAAAAAG
GAAGGGGAGGAAAATAGAAAGGAAGGGACGAGAGAAATAGGAGCAAGAAG
TGAAAAAAAACGAGGATGGCACATAAGGAGAACACAGAAAGAGAGACTAA
GCCCCAAAGAAAAAGAGAAAAGACATAGTCAGCGGGCAATGGGAAACACG
CATCAAGTGCAGAAATAAGACCTA
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