EY692192

Overview
NameEY692192
Unique NameEY692192
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692192 vs. ExPASy Swiss-Prot
Match: UPL5_ARATH (E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana GN=UPL5 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.321e-34
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 3 
Query:   24 VMMFPDVKEDYEELHEMLIDRSQLLAESFE*IARAEPEALRGGLFMEFKNEEATGPGVLREWFFLVCQALFNPQNALFVPCPNDRRRFYPN 296
            +++FPDVKED+EE+HEMLIDRS LL+ESFE I  A PEAL GGLFMEFKNEEATGPGVLREWF+LVCQ +FNP+N LF+   +D RRF PN
Sbjct:  497 MLLFPDVKEDFEEMHEMLIDRSNLLSESFEYIVGASPEALHGGLFMEFKNEEATGPGVLREWFYLVCQEIFNPKNTLFLRSADDFRRFSPN 587
The following BLAST results are available for this feature:
BLAST of EY692192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UPL5_ARATH8.321e-3473.63E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-098-A04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692192 ID=EY692192; Name=EY692192; organism=Citrus sinensis; type=EST; length=908bp
CGGACGCGTGGGCGGACGCGTGGGTGATGATGTTTCCCGATGTAAAGGAA
GACTATGAGGAGCTGCATGAGATGCTTATTGATAGGTCTCAGTTGTTGGC
AGAATCATTTGAGTAAATAGCACGTGCGGAACCAGAGGCACTGCGTGGTG
GTTTATTTATGGAATTCAAAAATGAGGAAGCTACTGGTCCCGGTGTTTTA
AGGGAATGGTTTTTCTTGGTATGCCAAGCTTTATTTAATCCACAAAATGC
TCTTTTTGTGCCATGCCCTAATGACCGTAGAAGGTTCTATCCTAATCATG
GTAAGTTTCCGCTGGCTTTTGATGCATGCATTTTTTAACTGGGTTCCATT
AATGTTGTCTGTTTGCCCTTTTCCAGACTTATAGTTACCCTATTCTGCAT
TGTAACGTGTATGGATATTTGAATATTATATGCACATTGAATCTGGACTA
TTATTTATTTGGCNAATAAAAAAAAAAAAATAAAAAAATATAAAAAATAA
AATAATAATAAAAAAAAAATAAAAAGGACCGCCGATAACCTGTATCCAAA
CTTAATTACTCCCACCATACCAAAACCAAAAATTGAAATATAATTGGACA
AACAACTATCATTTTCAGTCAGAATACCGTAATGAAAGGGGCGGGGCCCA
CAGAAGAAGGAAGGATGTAATCCGGACGTGGAAAGGTATTTAACACAACT
TACTCATTTAGCCCAACATGTATTATAAAACAAAGGGGGCCCCTTTTATA
ACACCCCCACCCCAGAGAAAAATAACGATAGAATCAATCACAATATAGAT
CATCCCGCGATTCCAACCGCTCTCCATTTAATAGGGGCGGGCAGAAAAGA
GGAAAAAGAGGACCCACACCCCGCCCCTCCCACCATCCAACCGCGGAAAC
CCAGCAAA
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