EY692189

Overview
NameEY692189
Unique NameEY692189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692189_ssr891 microsatellite EY692189_ssr891:891..902. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9208 contig Csv1_Contig9208:1..909. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692189 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.859e-41
Identity = 83/91 (91.21%), Postives = 90/91 (98.90%), Query Frame = 1
Query:   13 RIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTEMGKLEQKRLSNLLNEDPAVMERRSALAKRLELYRSAQSEIDAVAWSK 285
            RIGTT+LSYVNMVCA+LRNSIPKSIVYCQVREAKRSLLDHFFTE+GK+E KRLS+LLNEDPA+MERRSALAKRLELYRSAQ+EIDAVAWSK
Sbjct:  520 RIGTTILSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 610          
BLAST of EY692189 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.205e-40
Identity = 82/91 (90.11%), Postives = 90/91 (98.90%), Query Frame = 1
Query:   13 RIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTEMGKLEQKRLSNLLNEDPAVMERRSALAKRLELYRSAQSEIDAVAWSK 285
            RIGTT+LSYVNMVCA+LR+SIPKSIVYCQVREAKRSLLDHFFTE+GK+E KRLS+LLNEDPA+MERRSALAKRLELYRSAQ+EIDAVAWSK
Sbjct:  520 RIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 610          
BLAST of EY692189 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 2.513e-38
Identity = 77/91 (84.62%), Postives = 86/91 (94.51%), Query Frame = 1
Query:   13 RIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTEMGKLEQKRLSNLLNEDPAVMERRSALAKRLELYRSAQSEIDAVAWSK 285
            RIG+ VLSYVNMVCA LRNSIPKSIVYCQVREAKRSLLDHFF E+G ++ KRLS+LLNEDPA+MERRSA++KRLELYR+AQSEIDAVAWSK
Sbjct:  520 RIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLNEDPAIMERRSAISKRLELYRAAQSEIDAVAWSK 610          
BLAST of EY692189 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.755e-34
Identity = 71/91 (78.02%), Postives = 83/91 (91.21%), Query Frame = 1
Query:   13 RIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTEMGKLEQKRLSNLLNEDPAVMERRSALAKRLELYRSAQSEIDAVAWSK 285
            RIG+ VLSYVNMVCA LRNSIPKSIVYCQVREAKRSLLD FFTE+G+ E  +LS LL+EDPAV +RR+++AKRLELYRSAQ++I+AVAWSK
Sbjct:  520 RIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQRRTSIAKRLELYRSAQTDIEAVAWSK 610          
BLAST of EY692189 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.446e-27
Identity = 54/89 (60.67%), Postives = 76/89 (85.39%), Query Frame = 1
Query:   13 RIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTEMGKLEQKRLSNLLNEDPAVMERRSALAKRLELYRSAQSEIDAVAW 279
            +IG+ V +Y+NMVC +LRNS+PK++VYCQVREAKRSLL+ F+ ++G+ E+++L  +L+EDP +MERR  LAKRLELY+ A+ +IDAVAW
Sbjct:  525 KIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLMERRGTLAKRLELYKQARDDIDAVAW 613          
BLAST of EY692189 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.849e-24
Identity = 53/89 (59.55%), Postives = 72/89 (80.90%), Query Frame = 1
Query:   13 RIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTEMGKLEQKRLSNLLNEDPAVMERRSALAKRLELYRSAQSEIDAVAW 279
            RI + V +YVNMV  +LRN+IPK+ VYCQVR+AK +LL++F++++ K E K+L  LL+EDPA+M+RR   AKRLELY+ A+ EIDAVAW
Sbjct:  534 RIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLLDEDPALMDRRLECAKRLELYKKARDEIDAVAW 622          
BLAST of EY692189 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 8.122e-21
Identity = 46/89 (51.69%), Postives = 68/89 (76.40%), Query Frame = 1
Query:   13 RIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTEMGKLEQKRLSNLLNEDPAVMERRSALAKRLELYRSAQSEIDAVAW 279
            +I + V +Y+ MV  +L N+IPK++V+CQVR+AK SLL++F+ ++ + + KRL  LL+E+PA+MERR   AKRLELY+ A+ EIDA  W
Sbjct:  522 KIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENPALMERRMQCAKRLELYKKARDEIDAAVW 610          
The following BLAST results are available for this feature:
BLAST of EY692189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SDL5A_SOYBN1.859e-4191.21Dynamin-related protein 5A OS=Glycine max PE=2 SV=... [more]
SDLCA_SOYBN1.205e-4090.11Dynamin-related protein 12A OS=Glycine max PE=1 SV... [more]
DRP1A_ARATH2.513e-3884.62Dynamin-related protein 1A OS=Arabidopsis thaliana... [more]
DRP1B_ARATH3.755e-3478.02Dynamin-related protein 1B OS=Arabidopsis thaliana... [more]
DRP1C_ARATH4.446e-2760.67Dynamin-related protein 1C OS=Arabidopsis thaliana... [more]
DRP1E_ARATH7.849e-2459.55Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
DRP1D_ARATH8.122e-2151.69Dynamin-related protein 1D OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-098-A01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692189 ID=EY692189; Name=EY692189; organism=Citrus sinensis; type=EST; length=911bp
CCCACGCGTCCGAGAATTGGAACCACGGTCTTGTCTTATGTCAATATGGT
CTGTGCAAGTCTGCGGAACTCAATTCCTAAGTCCATCGTTTATTGTCAAG
TTCGTGAGGCCAAACGAAGCCTACTTGATCATTTCTTCACTGAAATGGGT
AAATTGGAGCAAAAACGATTGTCAAACCTGTTGAATGAAGATCCGGCAGT
CATGGAGCGACGATCTGCCCTTGCAAAAAGGTTGGAGTTATACAGGAGTG
CACAATCAGAAATTGATGCAGTTGCTTGGTCAAAGTAGTTCAACATTTTA
CCAGTCCATTTCAGCTCACGAATTTTGGCTTGATGGTGACTGTCATTCTT
TCAATTATGACTAGCCATGCAAGGGAGAAAGCGGCGGGATATTTCATTAT
ATTTCTATACCCCTAACTAGTAGTCAAGGTGTGATTACGCATATTTTATT
GTGTGAAATTATTTAAATGTTATGTTGGTTTCATATGCTACTCTTAAGTG
TTGCCTATAAAATACAAATTTTTTCGGCTTTCCAAAAAAAAAAAAAAGAC
AAAAAAAATAAAGAAAAAACAAAAGGAAAAAAAATAGGGCGGCCCGCTCC
AAGGGATCCAAAATTAAATTACACGTGGCTGGGCAACATCAAAACCTCCT
TTTAATGAGGTCACCCAAAATTCAAATTCCTGGGGCCACCGTTTTTAAAA
ACGACACGTGCGGGGAGAAAAAACCCGGGGCGTTACCCACACTTTATTTC
CCCCCTTGCAGAGCACAACCCCCCCTTTTTCCCCCACCGTGGGGGTAAAA
AAACAGGAAAAAAGGCCCCCGCCACCCGGTTACCCCCCCTCCCCAACCAA
AATATGCCCCACCCCCACAAATATGGGCGTAAAGGGGATCCCCTCCCTCC
CTGTGGATCCA
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